Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about traumatic brain injury: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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| Animal | Controlled cortical impact (CCI) model in APP/PS1 mice vs WT mice |
| Cellular | Neuronal and microglial cultures from TBI-conditioned media exposure |
| Human | Retrospective cohort of TBI patients with longitudinal biomarkers |
| Associated Genes | PTEN, TNF, ROS, ALS, TREM2, HMGB1, CXCR1, CX3CL1 |
| Therapeutic Agents | ACT001, rapamycin, quercetin |
| KG Connections | 273 knowledge graph edges |
| Databases | OMIMOrphanetClinicalTrialsPubMed |
Knowledge base pages for this entity
graph TD
traumatic_brain_injury["traumatic brain injury"] -->|"affects"| microglia["microglia"]
style microglia fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
traumatic_brain_injury["traumatic brain injury"] -->|"affects"| neurons["neurons"]
style neurons fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
traumatic_brain_injury["traumatic brain injury"] -->|"affects"| cortex["cortex"]
style cortex fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
traumatic_brain_injury["traumatic brain injury"] -->|"involves"| necroptosis["necroptosis"]
style necroptosis fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
traumatic_brain_injury["traumatic brain injury"] -->|"involves"| NF_kB_signaling["NF-kB signaling"]
style NF_kB_signaling fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
traumatic_brain_injury["traumatic brain injury"] -->|"affects"| blood_brain_barrier["blood-brain barrier"]
style blood_brain_barrier fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
traumatic_brain_injury["traumatic brain injury"] -->|"involves"| unfolded_protein_response["unfolded protein response"]
style unfolded_protein_response fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
PSMD14["PSMD14"] -->|"therapeutic target"| traumatic_brain_injury["traumatic brain injury"]
style PSMD14 fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
UCH_L1["UCH-L1"] -->|"biomarker for"| traumatic_brain_injury["traumatic brain injury"]
style UCH_L1 fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
BERGENIN["BERGENIN"] -->|"attenuates"| traumatic_brain_injury["traumatic brain injury"]
style BERGENIN fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
SHH["SHH"] -->|"protects against"| traumatic_brain_injury["traumatic brain injury"]
style SHH fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
STING["STING"] -->|"activates"| traumatic_brain_injury["traumatic brain injury"]
style STING fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
style traumatic_brain_injury fill:#ef5350,stroke:#4fc3f7,stroke-width:2px,color:#e0e0e0,font-weight:bold| Target | Relation | Type | Str |
|---|---|---|---|
| microglia | affects | cell_type | 0.90 |
| neurons | affects | cell_type | 0.90 |
| cortex | affects | brain_region | 0.90 |
| necroptosis | involves | pathway | 0.80 |
| NF-kB signaling | involves | pathway | 0.80 |
| blood-brain barrier | affects | brain_region | 0.80 |
| unfolded protein response | involves | pathway | 0.80 |
| pyroptosis | involves | pathway | 0.80 |
| apoptosis pathway | involves | pathway | 0.80 |
| neural stem cells | affects | cell_type | 0.80 |
| autophagy pathway | involves | pathway | 0.80 |
| ubiquitin-proteasome | involves | pathway | 0.80 |
| PI3K-AKT-mTOR signaling | involves | pathway | 0.80 |
| autophagy | inhibits | process | 0.70 |
| neuroinflammation | causes | process | 0.70 |
| mitophagy | associated_with | process | 0.70 |
| microglia | activates | cell_type | 0.70 |
| white matter | affects | brain_region | 0.70 |
| hippocampus | affects | brain_region | 0.70 |
| synaptic plasticity | involves | pathway | 0.60 |
| glymphatic clearance | involves | pathway | 0.60 |
| spinal cord | affects | brain_region | 0.60 |
| ferroptosis | involves | pathway | 0.60 |
| oxidative stress response | involves | pathway | 0.60 |
| oligodendrocytes | affects | cell_type | 0.60 |
| astrocytes | affects | cell_type | 0.60 |
| endothelial cells | affects | cell_type | 0.60 |
| mitochondrial function | involves | pathway | 0.60 |
| blood-brain barrier | involves | pathway | 0.60 |
| axon | disrupts | organelle | 0.60 |
| endosome | disrupts | organelle | 0.60 |
| temporal lobe | affects | brain_region | 0.60 |
| JAK-STAT signaling | involves | pathway | 0.60 |
| MAPK signaling | involves | pathway | 0.60 |
| TGF-beta signaling | involves | pathway | 0.60 |
| senescence | involves | pathway | 0.60 |
| complement cascade | involves | pathway | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| PSMD14 | therapeutic_target | protein | 0.90 |
| UCH-L1 | biomarker_for | protein | 0.88 |
| SHH | protects_against | protein | 0.80 |
| STING | activates | gene | 0.80 |
| SQSTM1 | biomarker_for | protein | 0.75 |
| APOE4 | interacts_with | gene | 0.75 |
| miR-124-3p | protects_against | process | 0.70 |
| PTEN | associated_with | protein | 0.70 |
| ACT001 | treats | drug | 0.70 |
| mitophagy | associated_with | process | 0.70 |
| PTEN | regulates | protein | 0.70 |
| AQP4 | expressed_in | gene | 0.70 |
| TNF | associated_with | gene | 0.70 |
| ALS | associated_with | gene | 0.70 |
| NLRP3 | inhibits | gene | 0.70 |
| NLRP3 | regulates | gene | 0.70 |
| APOE | associated_with | gene | 0.70 |
| LC3 | activates | gene | 0.70 |
| PI3K | activates | gene | 0.70 |
| ROS | activates | gene | 0.70 |
| NLRP3 | targets | gene | 0.70 |
| STING | regulates | gene | 0.70 |
| DNA | activates | gene | 0.70 |
| AMPK | activates | gene | 0.70 |
| ALS | causes | gene | 0.70 |
| TREM2 | protects_against | protein | 0.60 |
| ROS | associated_with | gene | 0.60 |
| GFAP | expressed_in | gene | 0.60 |
| RIPK3 | treats | gene | 0.60 |
| ALS | treats | gene | 0.60 |
| RIPK1 | treats | gene | 0.60 |
| AKT | inhibits | gene | 0.60 |
| AKT | regulates | gene | 0.60 |
| GFAP | treats | gene | 0.60 |
| BNIP3 | inhibits | gene | 0.60 |
| BNIP3 | regulates | gene | 0.60 |
| SLC17A7 | promotes | gene | 0.60 |
| CHMP4B | activates | gene | 0.60 |
| CHMP4B | regulates | gene | 0.60 |
| CHMP4B | protects_against | gene | 0.60 |
| CHMP4B | promotes | gene | 0.60 |
| TNF | activates | gene | 0.60 |
| TNF | treats | gene | 0.60 |
| RNA | treats | gene | 0.60 |
| NLRP3 | activates | gene | 0.60 |
| TLR4 | activates | gene | 0.60 |
| TLR4 | inhibits | gene | 0.60 |
| TLR4 | regulates | gene | 0.60 |
| NLRP3 | protects_against | gene | 0.60 |
| TLR4 | protects_against | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
neuroinflammation | 2026-04-15 | 2 hypotheses Top: 0.605
neurodegeneration | 2026-04-13 | 0 hypotheses
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||