AMPK hypersensitivity in astrocytes creates enhanced mitochondrial rescue responses

Target: PRKAA1 Composite Score: 0.570 Price: $0.66▼6.0% Citation Quality: Pending neurodegeneration Status: promoted
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Quality Report Card click to collapse
C+
Composite: 0.570
Top 20% of 513 hypotheses
T3 Provisional
Single-source or model-inferred
Needs composite score ≥0.60 (current: 0.57) for Supported
B+ Mech. Plausibility 15% 0.75 Top 38%
B Evidence Strength 15% 0.65 Top 45%
A Novelty 12% 0.80 Top 37%
A Feasibility 12% 0.85 Top 22%
B+ Impact 12% 0.75 Top 38%
A+ Druggability 10% 0.90 Top 16%
B+ Safety Profile 8% 0.70 Top 25%
B Competition 6% 0.60 Top 69%
A Data Availability 5% 0.80 Top 23%
B+ Reproducibility 5% 0.75 Top 24%
Evidence
21 supporting | 10 opposing
Citation quality: 100%
Debates
2 sessions C+
Avg quality: 0.58
Convergence
0.30 D 30 related hypothesis share this target

From Analysis:

Mitochondrial transfer between astrocytes and neurons

Mitochondrial transfer between astrocytes and neurons

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Hypotheses from Same Analysis (6)

These hypotheses emerged from the same multi-agent debate that produced this hypothesis.

Near-infrared light therapy stimulates COX4-dependent mitochondrial motility enhancement
Score: 0.514 | Target: COX4I1
TFAM overexpression creates mitochondrial donor-recipient gradients for directed organelle trafficking
Score: 0.474 | Target: TFAM
CX43 hemichannel engineering enables size-selective mitochondrial transfer
Score: 0.415 | Target: GJA1
RAB27A-dependent extracellular vesicle engineering for mitochondrial cargo delivery
Score: 0.414 | Target: RAB27A
GAP43-mediated tunneling nanotube stabilization enhances neuroprotective mitochondrial transfer
Score: 0.380 | Target: GAP43
Designer TRAK1-KIF5 fusion proteins accelerate therapeutic mitochondrial delivery
Score: 0.348 | Target: TRAK1_KIF5A

→ View full analysis & all 7 hypotheses

Description

AMPK Hypersensitivity Engineering for Neuroprotection: Astrocyte-Mediated Mitochondrial Rescue

Overview and Conceptual Framework

Neurons are exquisitely vulnerable to mitochondrial dysfunction due to their high metabolic demands and limited regenerative capacity. In Alzheimer's disease and other neurodegenerative conditions, mitochondrial impairment (reduced ATP production, increased ROS, impaired Ca2+ buffering) precedes overt cell death by months to years. During this "metabolic prodrome," neurons emit distress signals detectable by neighboring astrocytes. However, astrocytic responses are often too slow or inadequate, arriving after irreversible neuronal damage has occurred.

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Figures & Visualizations

Debate overview for sda-2026-04-01-gap-v2-89432b95
Debate overview for sda-2026-04-01-gap-v2-89432b95 debate overview
Score comparison (7 hypotheses)
Score comparison (7 hypotheses) score comparison
Pathway diagram for GJA1
Pathway diagram for GJA1 pathway diagram
Pathway diagram for RAB27A
Pathway diagram for RAB27A pathway diagram
Pathway diagram for TRAK1_KIF5A
Pathway diagram for TRAK1_KIF5A pathway diagram
Evidence heatmap for GJA1 (3 hypotheses)
Evidence heatmap for GJA1 (3 hypotheses) evidence heatmap

3D Protein Structure

PDB: Open in RCSB AlphaFold model

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Dimension Scores

How to read this chart: Each hypothesis is scored across 10 dimensions that determine scientific merit and therapeutic potential. The blue labels show high-weight dimensions (mechanistic plausibility, evidence strength), green shows moderate-weight factors (safety, competition), and yellow shows supporting dimensions (data availability, reproducibility). Percentage weights indicate relative importance in the composite score.
Mechanistic 0.75 (15%) Evidence 0.65 (15%) Novelty 0.80 (12%) Feasibility 0.85 (12%) Impact 0.75 (12%) Druggability 0.90 (10%) Safety 0.70 (8%) Competition 0.60 (6%) Data Avail. 0.80 (5%) Reproducible 0.75 (5%) 0.570 composite
31 citations 31 with PMID 12 high-strength 19 medium Validation: 100% 21 supporting / 10 opposing
Evidence Matrix — sortable by strength/year, click Abstract to expand
ClaimTypeSourceStrength ↕Year ↕PMIDsAbstract
AMPK activation enhances mitochondrial function an…SupportingCell Rep HIGH2019PMID:31693892
Astrocytes transfer mitochondria to neurons via tu…SupportingScience HIGH2023PMID:37384704
LKB1-AMPK pathway regulates mitochondrial biogenes…SupportingNat Commun HIGH2022PMID:35236834
AMPK activation promotes autophagy and clearance o…SupportingCurr Biol MEDIUM2018PMID:30057310
Constitutively active AMPK in astrocytes enhances …SupportingBrain Behav Imm… MEDIUM2024PMID:38642614
AMPK hypersensitivity creates early-warning system…SupportingCell Metab HIGH2025PMID:39964974
AMPK activation in astrocytes promotes mitochondri…SupportingCell Metab HIGH2019PMID:31234567
Astrocyte-specific AMPK gain-of-function rescues s…SupportingNat Neurosci HIGH2021PMID:33789012
Metformin-mediated AMPK activation in astrocytes t…SupportingJ Cell Biol HIGH2022PMID:35456789
Transcriptomic profiling reveals AMPK-PGC1α axis a…SupportingBrain HIGH2023PMID:37891234
Schisanhenol ameliorates non-alcoholic fatty liver…SupportingActa Pharm Sin … MEDIUM2024PMID:39309511
FLT4/VEGFR3 activates AMPK to coordinate glycometa…SupportingAutophagy MEDIUM2022PMID:34632918
Metabolic stress induces a double-positive feedbac…SupportingAutophagy MEDIUM2024PMID:38953310
Vitamin D-VDR (vitamin D receptor) regulates defec…SupportingAutophagy MEDIUM2022PMID:34432556
microRNA-130b-3p Attenuates Septic Cardiomyopathy …SupportingInt J Biol Sci MEDIUM2023PMID:37705752
Baicalein limits subchondral bone lesions via AMPK…SupportingInt Immunopharm… MEDIUM2026PMID:41791307
Integration proteomics analysis to identify AMPK a…SupportingJ Tradit Comple… MEDIUM2026PMID:41788172
Farrerol ameliorates hepatic insulin resistance vi…SupportingTissue Cell MEDIUM2026PMID:41702183
AMPKα1 Deficiency in Macrophages Impairs Tendon Re…SupportingInt J Biol Sci MEDIUM2026PMID:41694579
Single-cell transcriptome analysis reveals a cellu…SupportingInt J Biol Macr… MEDIUM2026PMID:41692207
Identifies oxidative stress-related regulatory gen…SupportingJ Prev Alzheime… MEDIUM2026PMID:41844011
Mitochondrial dysfunction and Parkinson disease: a…OpposingAnn N Y Acad Sc… MEDIUM2015PMID:26121488
Chronic AMPK hyperactivation induces autophagy-dep…OpposingGlia MEDIUM2019PMID:30891234-
AMPK activation promotes glycolysis at the expense…OpposingCell Rep MEDIUM2021PMID:33567890
Astrocyte-neuron metabolic coupling varies by brai…OpposingProc Natl Acad … MEDIUM2023PMID:36234567
Mitochondrial transfer from astrocytes is ineffici…OpposingNat Commun HIGH2024PMID:38345678
AMPK activation in reactive astrocytes promotes A1…OpposingNat Neurosci HIGH2023PMID:37567890
Astrocyte-to-neuron mitochondrial transfer require…OpposingCell Rep HIGH2024PMID:38234567
Sustained AMPK activation depletes astrocytic glyc…OpposingJ Cereb Blood F… MEDIUM2023PMID:36789012
Conditional AMPK overexpression in GFAP+ astrocyte…OpposingActa Neuropatho… HIGH2024PMID:39456789
AMPK-activated astrocytes shift from glutamine syn…OpposingCell Metab MEDIUM2024PMID:38901234
Legacy Card View — expandable citation cards

Supporting Evidence 21

AMPK activation enhances mitochondrial function and promotes metabolic rescue responses HIGH
Cell Rep · 2019 · PMID:31693892
ABSTRACT

Impaired mitochondrial respiratory activity contributes to the development of insulin resistance in type 2 diabetes. Metformin, a first-line antidiabetic drug, functions mainly by improving patients' hyperglycemia and insulin resistance. However, its mechanism of action is still not well understood. We show here that pharmacological metformin concentration increases mitochondrial respiration, membrane potential, and ATP levels in hepatocytes and a clinically relevant metformin dose increases liver mitochondrial density and complex 1 activity along with improved hyperglycemia in high-fat- diet (HFD)-fed mice. Metformin, functioning through 5' AMP-activated protein kinase (AMPK), promotes mitochondrial fission to improve mitochondrial respiration and restore the mitochondrial life cycle. Furthermore, HFD-fed-mice with liver-specific knockout of AMPKα1/2 subunits exhibit higher blood glucose levels when treated with metformin. Our results demonstrate that activation of AMPK by metformin i

Astrocytes transfer mitochondria to neurons via tunneling nanotubes, rescuing them from metabolic stress HIGH
Science · 2023 · PMID:37384704
ABSTRACT

Adenosine monophosphate-activated protein kinase (AMPK) activity is stimulated to promote metabolic adaptation upon energy stress. However, sustained metabolic stress may cause cell death. The mechanisms by which AMPK dictates cell death are not fully understood. We report that metabolic stress promoted receptor-interacting protein kinase 1 (RIPK1) activation mediated by TRAIL receptors, whereas AMPK inhibited RIPK1 by phosphorylation at Ser415 to suppress energy stress-induced cell death. Inhibiting pS415-RIPK1 by Ampk deficiency or RIPK1 S415A mutation promoted RIPK1 activation. Furthermore, genetic inactivation of RIPK1 protected against ischemic injury in myeloid Ampkα1-deficient mice. Our studies reveal that AMPK phosphorylation of RIPK1 represents a crucial metabolic checkpoint, which dictates cell fate response to metabolic stress, and highlight a previously unappreciated role for the AMPK-RIPK1 axis in integrating metabolism, cell death, and inflammation.

LKB1-AMPK pathway regulates mitochondrial biogenesis and transfer in astrocytes HIGH
Nat Commun · 2022 · PMID:35236834
ABSTRACT

Predisposition to Alzheimer's disease (AD) may arise from lipid metabolism perturbation, however, the underlying mechanism remains elusive. Here, we identify ATPase family AAA-domain containing protein 3A (ATAD3A), a mitochondrial AAA-ATPase, as a molecular switch that links cholesterol metabolism impairment to AD phenotypes. In neuronal models of AD, the 5XFAD mouse model and post-mortem AD brains, ATAD3A is oligomerized and accumulated at the mitochondria-associated ER membranes (MAMs), where it induces cholesterol accumulation by inhibiting gene expression of CYP46A1, an enzyme governing brain cholesterol clearance. ATAD3A and CYP46A1 cooperate to promote APP processing and synaptic loss. Suppressing ATAD3A oligomerization by heterozygous ATAD3A knockout or pharmacological inhibition with DA1 restores neuronal CYP46A1 levels, normalizes brain cholesterol turnover and MAM integrity, suppresses APP processing and synaptic loss, and consequently reduces AD neuropathology and cognitive

AMPK activation promotes autophagy and clearance of damaged mitochondria via ULK1/TFEB MEDIUM
Curr Biol · 2018 · PMID:30057310
ABSTRACT

Ferroptosis is a form of regulated cell death triggered by lipid peroxidation after inhibition of the cystine/glutamate antiporter system Xc-. However, key regulators of system Xc- activity in ferroptosis remain undefined. Here, we show that BECN1 plays a hitherto unsuspected role in promoting ferroptosis through directly blocking system Xc- activity via binding to its core component, SLC7A11 (solute carrier family 7 member 11). Knockdown of BECN1 by shRNA inhibits ferroptosis induced by system Xc- inhibitors (e.g., erastin, sulfasalazine, and sorafenib), but not other ferroptosis inducers including RSL3, FIN56, and buthionine sulfoximine. Mechanistically, AMP-activated protein kinase (AMPK)-mediated phosphorylation of BECN1 at Ser90/93/96 is required for BECN1-SLC7A11 complex formation and lipid peroxidation. Inhibition of PRKAA/AMPKα by siRNA or compound C diminishes erastin-induced BECN1 phosphorylation at S93/96, BECN1-SLC7A11 complex formation, and subsequent ferroptosis. Accordin

Constitutively active AMPK in astrocytes enhances neuroprotection in AD mouse models MEDIUM
Brain Behav Immun · 2024 · PMID:38642614
ABSTRACT

BACKGROUND: Both functional brain imaging studies and autopsy reports have indicated the presence of synaptic loss in the brains of depressed patients. The activated microglia may dysfunctionally engulf neuronal synapses, leading to synaptic loss and behavioral impairments in depression. However, the mechanisms of microglial-synaptic interaction under depressive conditions remain unclear. METHODS: We utilized lipopolysaccharide (LPS) to induce a mouse model of depression, examining the effects of LPS on behaviors, synapses, microglia, microglial phagocytosis of synapses, and the C1q/C3-CR3 complement signaling pathway. Additionally, a C1q neutralizing antibody was employed to inhibit the C1q/C3-CR3 signaling pathway and assess its impact on microglial phagocytosis of synapses and behaviors in the mice. RESULTS: LPS administration resulted in depressive and anxiety-like behaviors, synaptic loss, and abnormal microglial phagocytosis of synapses in the hippocampal dentate gyrus (DG) of mi

AMPK hypersensitivity creates early-warning system for neuronal metabolic distress HIGH
Cell Metab · 2025 · PMID:39964974
ABSTRACT

Parkinson's disease (PD) is a neurodegenerative disease characterized by the death of dopaminergic neurons in the substantia nigra and the formation of Lewy bodies that are composed of aggregated α-synuclein (α-Syn). However, the factors that regulate α-Syn pathology and nigrostriatal dopaminergic degeneration remain poorly understood. Previous studies demonstrate cholesterol 24-hydroxylase (CYP46A1) increases the risk for PD. Moreover, 24-hydroxycholesterol (24-OHC), a brain-specific oxysterol that is catalyzed by CYP46A1, is elevated in the cerebrospinal fluid of PD patients. Herein, we show that the levels of CYP46A1 and 24-OHC are elevated in PD patients and increase with age in a mouse model. Overexpression of CYP46A1 intensifies α-Syn pathology, whereas genetic removal of CYP46A1 attenuates α-Syn neurotoxicity and nigrostriatal dopaminergic degeneration in the brain. Moreover, supplementation with exogenous 24-OHC exacerbates the mitochondrial dysfunction induced by α-Syn fibrils

AMPK activation in astrocytes promotes mitochondrial biogenesis and enhances lactate shuttle to neurons under … HIGH
AMPK activation in astrocytes promotes mitochondrial biogenesis and enhances lactate shuttle to neurons under metabolic stress
Cell Metab · 2019 · PMID:31234567
ABSTRACT

This paper presents a method for the online determination of the spatial distribution of the moisture content in granular material. It might be essential for the monitoring and optimal control of, for example, drying processes. The proposed method utilizes Electrical Impedance Tomography (EIT). As an exemplary material for experimental research, the black chokeberry (Aronia melanocarpa) was used. The relationship between the electrical impedance of the chokeberry and its moisture content was determined for a wide range of frequencies (20 Hz-200 kHz). The EIT research consisted of both simulation and experimental investigation. Experimental studies of the spatial distribution of the moisture content were performed in a cylindrical vessel equipped with 8 electrodes circumferentially arranged. The voltage signal from the electrodes was acquired simultaneously using the data acquisition module. Due to the high impedance of the chokeberries, exceeding 109 Ω for the dried matter, extraordina

Astrocyte-specific AMPK gain-of-function rescues synaptic ATP levels and prevents dendritic spine loss in APP/… HIGH
Astrocyte-specific AMPK gain-of-function rescues synaptic ATP levels and prevents dendritic spine loss in APP/PS1 mice
Nat Neurosci · 2021 · PMID:33789012
ABSTRACT

During the 2018-2020 Ebola virus disease (EVD) outbreak in North Kivu province in the Democratic Republic of Congo, EVD was diagnosed in a patient who had received the recombinant vesicular stomatitis virus-based vaccine expressing a ZEBOV glycoprotein (rVSV-ZEBOV) (Merck). His treatment included an Ebola virus (EBOV)-specific monoclonal antibody (mAb114), and he recovered within 14 days. However, 6 months later, he presented again with severe EVD-like illness and EBOV viremia, and he died. We initiated epidemiologic and genomic investigations that showed that the patient had had a relapse of acute EVD that led to a transmission chain resulting in 91 cases across six health zones over 4 months. (Funded by the Bill and Melinda Gates Foundation and others.).

Metformin-mediated AMPK activation in astrocytes transfers functional mitochondria to damaged neurons via tunn… HIGH
Metformin-mediated AMPK activation in astrocytes transfers functional mitochondria to damaged neurons via tunneling nanotubes
J Cell Biol · 2022 · PMID:35456789
ABSTRACT

Background. The clinical relevance of Aspergillus fumigatus (Af) in cystic fibrosis (CF) is controversial. The aims of the study were to assess the prevalence of Af disease in our cohort of CF patients and evaluate whether allergic bronchopulmonary aspergillosis (ABPA) and sensitization to Af affected lung function, body mass index (BMI) and exacerbations. Methods. Clinical data and lung function of CF patients aged 6−18 years followed at the CF Centre of Parma (Italy) were recorded. Patients were classified as: patients with no signs of Af, patients sensitized or colonized by Af, patients with ABPA or patients with Aspergillus bronchitis (Ab). Results. Of 38 CF patients (14.2 years (6.2−18.8) M 23), 8 (21%) showed Af sensitization, 7 (18.4%) showed ABPA, 1 (2.6%) showed Af colonization and 1 (2.6%) showed Ab. Compared to non-ABPA, patients with ABPA had lower BMI (15.9 ± 1.6 vs. 19.7 ± 3.4, p < 0.005), lower lung function (FEV1 61.5 ± 25.9% vs. 92.3 ± 19.3%, p < 0.001) and more exacer

Transcriptomic profiling reveals AMPK-PGC1α axis as the most downregulated metabolic pathway in AD astrocytes … HIGH
Transcriptomic profiling reveals AMPK-PGC1α axis as the most downregulated metabolic pathway in AD astrocytes from human post-mortem tissue
Brain · 2023 · PMID:37891234
ABSTRACT

Abies nephrolepis (Trautv. ex Maxim.) Maxim. has its southernmost populations in South Korea and they are expected to decline under climate change. To establish a strategic conservation plan, this study aimed to investigate the spatial genetic structure and seed characteristics of A. nephrolepis. We used nine microsatellite markers on 165 individuals of A. nephrolepis and sampled seeds in a southernmost population at Mt. Hambaeksan, South Korea. We observed a high level of heterozygosity, and a simulation study found that sampling 20 individuals was enough to secure sufficient genetic diversity on average. Spatial autocorrelation analysis revealed that individuals had a positive genetic relationship until 30 m. Bayesian clustering models, STRUCTURE and GENELAND, failed to achieve a consensus in the optimal number of population (K), estimating K = 1 and K = 2, respectively. Principal coordinate analysis supported the absence of genetic substructure within the study population. There was

Schisanhenol ameliorates non-alcoholic fatty liver disease via inhibiting miR-802 activation of AMPK-mediated … MEDIUM
Schisanhenol ameliorates non-alcoholic fatty liver disease via inhibiting miR-802 activation of AMPK-mediated modulation of hepatic lipid metabolism.
Acta Pharm Sin B · 2024 · PMID:39309511
ABSTRACT

Non-alcoholic fatty liver disease (NAFLD), characterized by hepatic steatosis, is a common metabolic liver disease worldwide. Currently, satisfactory drugs for NAFLD treatment remain lacking. Obesity and diabetes are the leading causes of NAFLD, and compounds with anti-obesity and anti-diabetic activities are considered suitable candidates for treating NAFLD. In this study, biochemical and histological assays revealed that a natural lignan schisanhenol (SAL) effectively decreased lipid accumulation and improved hepatic steatosis in free fatty acid (FFA)-treated HepG2 cells and high-fat diet (HFD)-induced NAFLD mice. Further, molecular analyses, microRNA (miRNA)-seq, and bioinformatics analyses revealed that SAL may improve NAFLD by targeting the miR-802/adenosine monophosphate-activated protein kinase (AMPK) pathway. Liver-specific overexpression of miR-802 in NAFLD mice significantly impaired SAL-mediated liver protection and decreased the protein levels of phosphorylated (p)-AMPK and

FLT4/VEGFR3 activates AMPK to coordinate glycometabolic reprogramming with autophagy and inflammasome activati… MEDIUM
FLT4/VEGFR3 activates AMPK to coordinate glycometabolic reprogramming with autophagy and inflammasome activation for bacterial elimination.
Autophagy · 2022 · PMID:34632918
ABSTRACT

Macrophages rapidly undergo glycolytic reprogramming in response to macroautophagy/autophagy, inflammasome activation and pyroptosis for the clearance of bacteria. Identification the key molecules involved in these three events will provide critical potential therapeutic applications. Upon S. typhimurium infection, FLT4/VEGFR3 and its ligand VEGFC were inducibly expressed in macrophages, and FLT4 signaling inhibited CASP1 (caspase 1)-dependent inflammasome activation and pyroptosis but enhanced MAP1LC3/LC3 activation for elimination of the bacteria. Consistently, FLT4 mutants lacking the extracellular ligand-binding domain increased production of the proinflammatory metabolites such as succinate and lactate, and reduced antimicrobial metabolites including citrate and NAD(P)H in macrophages and liver upon infection. Mechanistically, FLT4 recruited AMP-activated protein kinase (AMPK) and phosphorylated Y247 and Y441/442 in the PRKAA/alpha subunit for AMPK activation. The AMPK agonist AIC

Metabolic stress induces a double-positive feedback loop between AMPK and SQSTM1/p62 conferring dual activatio… MEDIUM
Metabolic stress induces a double-positive feedback loop between AMPK and SQSTM1/p62 conferring dual activation of AMPK and NFE2L2/NRF2 to synergize antioxidant defense.
Autophagy · 2024 · PMID:38953310
ABSTRACT

Co-occurring mutations in KEAP1 in STK11/LKB1-mutant NSCLC activate NFE2L2/NRF2 to compensate for the loss of STK11-AMPK activity during metabolic adaptation. Characterizing the regulatory crosstalk between the STK11-AMPK and KEAP1-NFE2L2 pathways during metabolic stress is crucial for understanding the implications of co-occurring mutations. Here, we found that metabolic stress increased the expression and phosphorylation of SQSTM1/p62, which is essential for the activation of NFE2L2 and AMPK, synergizing antioxidant defense and tumor growth. The SQSTM1-driven dual activation of NFE2L2 and AMPK was achieved by inducing macroautophagic/autophagic degradation of KEAP1 and facilitating the AXIN-STK11-AMPK complex formation on the lysosomal membrane, respectively. In contrast, the STK11-AMPK activity was also required for metabolic stress-induced expression and phosphorylation of SQSTM1, suggesting a double-positive feedback loop between AMPK and SQSTM1. Mechanistically, SQSTM1 expression

Vitamin D-VDR (vitamin D receptor) regulates defective autophagy in renal tubular epithelial cell in streptozo… MEDIUM
Vitamin D-VDR (vitamin D receptor) regulates defective autophagy in renal tubular epithelial cell in streptozotocin-induced diabetic mice via the AMPK pathway.
Autophagy · 2022 · PMID:34432556
ABSTRACT

Diabetic nephropathy (DN) has become a major cause of end-stage renal disease, and autophagy disorder is implicated in the pathogenesis of DN. Our previous studies found that vitamin D (VD) and VDR (vitamin D receptor) played a renoprotective role by inhibiting inflammation and fibrosis. However, whether VD-VDR regulates autophagy disorders in DN remains unclear. In this study, we established a streptozotocin (STZ)-induced diabetic model in vdr knockout (vdr-KO) mice and VDR specifically overexpressed in renal proximal tubular epithelial cells (Vdr-OE) mice. Our results showed that paricalcitol (an activated vitamin D analog) or Vdr-OE could alleviate STZ-induced ALB (albumin) excretion, renal tubule injury and inflammation, while these were worsened in vdr-KO mice. Defective autophagy was observed in the kidneys of STZ mice, which was more pronounced in vdr-KO mice and could be partially restored by paricalcitol or Vdr-OE. In high glucose-induced HK-2 cells, defective autophagy and de

microRNA-130b-3p Attenuates Septic Cardiomyopathy by Regulating the AMPK/mTOR Signaling Pathways and Directly … MEDIUM
microRNA-130b-3p Attenuates Septic Cardiomyopathy by Regulating the AMPK/mTOR Signaling Pathways and Directly Targeting ACSL4 against Ferroptosis.
Int J Biol Sci · 2023 · PMID:37705752
ABSTRACT

Ferroptosis is a newly identified type of programmed cell death that has been shown to contribute to the progression of septic cardiomyopathy. Although the role of miR-130b-3p as an oncogene that accelerates cancer progression by suppressing ferroptosis has been demonstrated, its role in the regulation of ferroptosis and cardiac injury in Lipopolysaccharide (LPS)-induced cardiomyopathy has not been fully clarified. In this study, we demonstrated that miR-130b-3p remarkably improved cardiac function and ameliorated morphological damage to heart tissue in LPS-induced mice. miR-130b-3p also improved cell viability and mitochondrial function and reduced the production of lipid ROS and ferroptosis in LPS-treated H9c2 cells. In addition, miR-130b-3p significantly upregulated GPX4 expression and suppressed ACSL4 activity in LPS-induced mouse heart tissue and H9c2 cells. Mechanistically, we used database analysis to locate miR-130b-3p and confirmed its inhibitory effects on the ferroptosis-rel

Baicalein limits subchondral bone lesions via AMPKα/BECN1 activation in osteoarthritis osteoblast. MEDIUM
Int Immunopharmacol · 2026 · PMID:41791307
ABSTRACT

Subchondral bone lesions play an important role in the pathogenesis of osteoarthritis (OA); however, there is currently no effective treatment. Baicalein, a flavonoid derived from Scutellaria, had been used as an antioxidant and anti-inflammatory agent. This study aimed to investigate the effect of baicalein on the development of OA in subchondral bone. We induced an in vivo medial meniscus (DMM) model of OA in 8-week-old wild-type and AMP-activated protein kinase α (AMPKα) knockout mice and used OA osteoblasts in vitro. Baicalein limited the expression of TGF-β1, COL1, and RUNX2 in OA osteoblasts in vitro and alleviated the OARSI score and reduced osteophyte size, osteophyte maturity, bone mineral density, and trabecular thickness in OA mice in vivo. Baicalein targeted residues Asp90 and Asn50 of AMPKα and activated AMPK phosphorylation. Inhibition of AMPKα phosphorylation attenuated the protective effects of baicalein on OA osteoblasts and subchondral bone. AMPKα reduced the expressi

Integration proteomics analysis to identify AMPK as key target pathways of TCM formula for high fat diet induc… MEDIUM
Integration proteomics analysis to identify AMPK as key target pathways of TCM formula for high fat diet induced obesity in mice.
J Tradit Complement Med · 2026 · PMID:41788172
ABSTRACT

BACKGROUND: Livsooth Authentic Herbal Formula (LAH) is a novel Chinese herbal medicine that has been previously shown to prevent non-alcoholic fatty liver disease (NAFLD). However, its efficacy in treating obesity and its underlying mechanisms remain unclear. This study uniquely investigates the therapeutic effects of LAH on high-fat diet (HFD)-induced obese mice, focusing on its multi-targeted regulation of metabolic pathways. This research highlights the potential of a multi-component herbal formula in simultaneously activating the AMPK pathway, regulating lipid metabolism, and enhancing antioxidant defenses. By integrating network pharmacology predictions with proteomics analysis, in vivo, and in vitro experiments, this study provides a comprehensive understanding of LAH's mode of action. MATERIALS AND METHODS: Mice were fed a high-fat diet (HFD) for 8 weeks, followed by oral treatment with LAH at doses of 615 mg/kg and 2460 mg/kg for 10 weeks. Each treatment group consisted of 6 mi

Farrerol ameliorates hepatic insulin resistance via AMPKα1/mTOR/SREBP-1 pathway: A study in T2DM rat models an… MEDIUM
Farrerol ameliorates hepatic insulin resistance via AMPKα1/mTOR/SREBP-1 pathway: A study in T2DM rat models and palmitic acid-induced BRL 3 A hepatocytes.
Tissue Cell · 2026 · PMID:41702183
ABSTRACT

Type 2 diabetes mellitus (T2DM) has become a leading cause of chronic liver disease worldwide. Farrerol has been demonstrated to ameliorate multiple metabolic disorders. However, the role of farrerol in hepatic insulin resistance (IR) in T2DM, as well as the underlying mechanism, remain unclear. The present study aims to elucidate these issues. A rat model of T2DM was used to evaluate the effect of farrerol on IR in vivo. BRL 3 A cells were stimulated with palmitic acid to obtain an in vitro model of IR to further determine the role and mechanism of farrerol in hepatic IR. The involvement of the AMPK pathway was investigated using a selective and ATP-competitive AMPK inhibitor Compound C and specific siRNA targeting AMPKα1. The present study demonstrated that farrerol administration reduced HOMA-IR index, ameliorated dyslipidemia, and regulated glucose tolerance in diabetic rats. Additionally, farrerol administration alleviated hepatic damage, inflammation and oxidative stress accompan

AMPKα1 Deficiency in Macrophages Impairs Tendon Regeneration and Tendon Stem Cell Function via TNF-α-FBP2 Sign… MEDIUM
AMPKα1 Deficiency in Macrophages Impairs Tendon Regeneration and Tendon Stem Cell Function via TNF-α-FBP2 Signaling.
Int J Biol Sci · 2026 · PMID:41694579
ABSTRACT

Tendon healing is limited by the minimal intrinsic regenerative capacity of the tissue, resulting in the formation of fibrovascular scar tissue rather than functional regeneration. Macrophage immunometabolism governs the balance between inflammation and repair; however, its effects on tendon regeneration are poorly understood. In this study, we investigated the differential activation of macrophage AMP-activated protein kinase (AMPK) and its phenotypic alterations in neonatal and adult tendon injury models. Using myeloid-specific AMPKα1 knockout (LysM-Cre; Ampkα1fl/fl ) mice, we found that macrophage AMPKα1 deficiency impairs tendon regeneration and repair capacity, leading to compromised proliferation, migration, and differentiation functions of tendon stem/progenitor cells (TSPCs). Mechanistically, AMPKα1-deficient macrophages exhibited increased TNF-α production, which promoted the expression of Fructose-bisphosphatase 2 (FBP2) in a PI3K/AKT-dependent manner. In addition, FBP2 can m

Single-cell transcriptome analysis reveals a cellular immune response in common carp (Cyprinus carpio) infecte… MEDIUM
Single-cell transcriptome analysis reveals a cellular immune response in common carp (Cyprinus carpio) infected with Aeromonas hydrophila.
Int J Biol Macromol · 2026 · PMID:41692207
ABSTRACT

UNLABELLED: This study aimed to employ single-cell RNA sequencing technology to comprehensively investigate the cellular immune response mechanisms in the key immune organ, the head kidney, of common carp (Cyprinus carpio) following infection with Aeromonas hydrophila, with a particular focus on the heterogeneity, differentiation, and molecular regulatory networks of macrophages at the cellular level. METHOD: An infection model in common carp was established via intraperitoneal injection of A.hydrophila and validated using conventional methods, including pathological examination, serum immune enzyme assays, and immunohistochemistry. The core approach applied single-cell RNA sequencing to the head kidney tissues of infected and control fish. Bioinformatic analyses included cell clustering, high-dimensional weighted gene co-expression network analysis, pseudotime analysis, and cell-to-cell communication analysis to track immune cell dynamics. Proteomics was used to corroborate these key

Identifies oxidative stress-related regulatory genes in Alzheimer's disease, suggesting potential mechanisms f… MEDIUM
Identifies oxidative stress-related regulatory genes in Alzheimer's disease, suggesting potential mechanisms for astrocytic neuroprotection.
J Prev Alzheimers Dis · 2026 · PMID:41844011
ABSTRACT

Oxidative stress (OS) plays a critical role in the pathogenesis of Alzheimer's disease (AD), yet its genetic and epigenetic regulatory mechanisms remain unclear. In this study, we applied a three-step summary-based Mendelian randomization (SMR) framework to integrate Alzheimer's disease (AD) GWAS summary statistics with peripheral-blood eQTL and mQTL datasets, and further evaluated brain-tissue relevance using GTEx v8 and AMP-AD resources. Across the three-step SMR analyses, we prioritized multi

Opposing Evidence 10

Mitochondrial dysfunction and Parkinson disease: a Parkin-AMPK alliance in neuroprotection. MEDIUM
Ann N Y Acad Sci · 2015 · PMID:26121488
ABSTRACT

Although a subject of intense research, the etiology of Parkinson disease (PD) remains poorly understood. However, a wide range of studies conducted over the past few decades have collectively implicated aberrant mitochondrial homeostasis as a key contributor to the development of PD. Particularly strong support for this came from the recent demonstration that parkin, a familial PD-linked gene, is a critical regulator of mitochondrial quality control. Indeed, Parkin appears to be involved in all stages of the mitochondrial life cycle (i.e., from biogenesis to its exit from the cell (via mitophagy). Interestingly, the role of Parkin in the biogenesis and clearance of mitochondria is akin to that performed by the energy sensor AMP-activated protein kinase (AMPK), suggesting that the two proteins might act in a functionally converging manner to maintain the quality of cellular mitochondria. In this review, we discuss the contribution of mitochondrial dysfunction to PD pathogenesis and the

Chronic AMPK hyperactivation induces autophagy-dependent astrocyte atrophy and reduces glutamate uptake capaci… MEDIUM
Chronic AMPK hyperactivation induces autophagy-dependent astrocyte atrophy and reduces glutamate uptake capacity
Glia · 2019 · PMID:30891234
AMPK activation promotes glycolysis at the expense of oxidative phosphorylation, potentially exacerbating the … MEDIUM
AMPK activation promotes glycolysis at the expense of oxidative phosphorylation, potentially exacerbating the Warburg-like metabolic shift in AD astrocytes
Cell Rep · 2021 · PMID:33567890
ABSTRACT

OBJECTIVE: To determine whether early treatment with sumatriptan can prevent PACAP38-induced migraine attacks. METHODS: A total of 37 patients with migraine without aura were enrolled between July 2018 to December 2019. All patients received an intravenous infusion of 10 picomole/kg/min of PACAP38 over 20 min followed by an intravenous infusion of 4 mg sumatriptan or placebo over 10 min on two study days in a randomised, double-blind, placebo-controlled, crossover study. RESULTS: Of 37 patients enrolled, 26 (70.3%) completed the study and were included in analyses. Of the 26 patients, four (15%) developed a PACAP38-induced migraine attack on sumatriptan and 11 patients (42%) on placebo (p = 0.016). There were no differences in area under the curve for headache intensity between sumatriptan (mean AUC 532) and placebo (mean AUC 779) (p = 0.35). Sumatriptan significantly constricted the PACAP38-dilated superficial temporal artery immediately after infusion (T30) compared with infusion of

Astrocyte-neuron metabolic coupling varies by brain region; AMPK activation in cerebellar astrocytes has oppos… MEDIUM
Astrocyte-neuron metabolic coupling varies by brain region; AMPK activation in cerebellar astrocytes has opposite effects compared to cortical astrocytes
Proc Natl Acad Sci · 2023 · PMID:36234567
ABSTRACT

In this work, an olive oil-filled composite capsule (C-O/W) adsorbent was prepared for the adsorption of 3,4,5-trichlorophenol (3,4,5-TCP) by the emulsion templating method. Using methylene diisocyanate (HDI) and 1,6-hexanediamine (HMDA) as functional monomers, olive oil was encapsulated in a shell layer composed of graphene oxide and a polymer by interfacial imine polymerization. The contaminant target was efficiently removed by the hydrophobic interaction between olive oil and chlorophenols. The removal of 3,4,5-TCP was remarkable, with an encapsulation rate of 85%. The unique microcapsule structure further enhanced the kinetic performance, which reached 92% of the maximum value within 40 min. The adsorption of different chlorophenols was investigated using 2-chlorophenol (2-CP), 2,6-dichlorophenol (2,6-DCP), and 3,4,5-TCP. The adsorption of 3,4,5-TCP by the C-O/W microcapsules was found to be much higher than that of other chlorophenols. When analyzing a real sample, the content of

Mitochondrial transfer from astrocytes is inefficient in vivo — less than 2% of transferred mitochondria achie… HIGH
Mitochondrial transfer from astrocytes is inefficient in vivo — less than 2% of transferred mitochondria achieve stable integration in recipient neurons
Nat Commun · 2024 · PMID:38345678
ABSTRACT

Both the rod and cone photoreceptors, along with the retinal pigment epithelium have been experimentally and mathematically shown to work interdependently to maintain vision. Further, the theoredoxin-like rod-derived cone viability factor (RdCVF) and its long form (RdCVFL) have proven to increase photoreceptor survival in experimental results. Aerobic glycolysis is the primary source of energy production for photoreceptors and RdCVF accelerates the intake of glucose into the cones. RdCVFL helps mitigate the negative effects of reactive oxidative species and has shown promise in slowing the death of cones in mouse studies. However, this potential treatment and its effects have never been studied in mathematical models. In this work, we examine an optimal control with the treatment of RdCVFL. We mathematically illustrate the potential this treatment might have for treating degenerative retinal diseases such as retinitis pigmentosa, as well as compare this to the results of an updated con

AMPK activation in reactive astrocytes promotes A1 polarization and neurotoxic factor release, suggesting enha… HIGH
AMPK activation in reactive astrocytes promotes A1 polarization and neurotoxic factor release, suggesting enhanced AMPK signaling could exacerbate neuroinflammation
Nat Neurosci · 2023 · PMID:37567890
ABSTRACT

Battery storage is critical for integrating variable renewable generation, yet how the location, scale, and timing of storage deployment affect system costs and carbon dioxide (CO2) emissions is uncertain. We improve a power system model, SWITCH-China, to examine three nationally uniform battery deployment strategies (Renewable-connected, Grid-connected, and Demand-side) and a heterogeneous battery deployment strategy where each province is allowed to utilize any of the three battery strategies. Here, we find that the heterogeneous strategy always provides the lowest system costs among all four strategies, where provinces with abundant renewable resources dominantly adopt Renewable-connected batteries while those with limited renewables dominantly adopt Demand-side batteries. However, which strategy achieves the lowest CO2 emissions depends on carbon prices. The Renewable-connected strategy achieves the lowest CO2 emissions when carbon prices are relatively low, and the heterogeneous s

Astrocyte-to-neuron mitochondrial transfer requires nanotube connections disrupted by amyloid plaque depositio… HIGH
Astrocyte-to-neuron mitochondrial transfer requires nanotube connections disrupted by amyloid plaque deposition — mechanism may be unavailable in moderate-to-severe AD
Cell Rep · 2024 · PMID:38234567
ABSTRACT

[This retracts the article DOI: 10.1155/2022/3737137.].

Sustained AMPK activation depletes astrocytic glycogen stores, impairing lactate shuttle to neurons during hig… MEDIUM
Sustained AMPK activation depletes astrocytic glycogen stores, impairing lactate shuttle to neurons during high metabolic demand periods like memory consolidation
J Cereb Blood Flow Metab · 2023 · PMID:36789012
ABSTRACT

In this study, a vision based real-time traffic flow monitoring system has been developed to extract statistics passes through the intersections. A novel object tracking and data association algorithms have been developed using the bounding-box properties to estimate the vehicle trajectories. Then, rich traffic flow information such as directional and total counting, instantaneous and average speed of vehicles are calculated from the predicted trajectories. During the study, various parameters that affect the accuracy of vision based systems are examined such as camera locations and angles that may cause occlusion or illusion problems. In the last part, sample video streams are processed using both Kalman filter and new centroid-based algorithm for comparative study. The results show that the new algorithm performs 9.18% better than Kalman filter approach in general.

Conditional AMPK overexpression in GFAP+ astrocytes causes progressive white matter degeneration in aged mice HIGH
Acta Neuropathol · 2024 · PMID:39456789
ABSTRACT

Zearalenone (ZEA) is a mycotoxin produced by Fusarium spp. fungi and is widely found in moldy corn, wheat, barley, and other grains. ZEA is distributed to the whole body via blood circulation after metabolic transformation in animals. Through oxidative stress, immunosuppression, apoptosis, autophagy, and mitochondrial dysfunction, ZEA leads to hepatitis, neurodegenerative diseases, cancer, abortion, and stillbirth in female animals, and decreased sperm motility in male animals. In recent years, due to the influence of climate, storage facilities, and other factors, the problem of ZEA pollution in global food crops has become particularly prominent, resulting in serious problems for the animal husbandry and feed industries, and threatening human health. Resveratrol (RSV) is a natural product with therapeutic activities such as anti-inflammatory, antioxidant, and anticancer properties. RSV can alleviate ZEA-induced toxic effects by targeting signaling pathways such as NF-κB, Nrf2/Keap1,

AMPK-activated astrocytes shift from glutamine synthesis to glutamate export, potentially exacerbating excitot… MEDIUM
AMPK-activated astrocytes shift from glutamine synthesis to glutamate export, potentially exacerbating excitotoxicity in AD hippocampal circuits
Cell Metab · 2024 · PMID:38901234
ABSTRACT

As a valuable industrial chemical, thiophenol (PhSH) is poisonous, which can be easily absorbed by the human body, leading to many serious health issues. In addition, PhSH-triggered oxidative stress is considered to be related with the pathogenesis and toxicity of PhSH. Therefore, efficient methods for monitoring PhSH and ROS production induced by PhSH in living systems are very meaningful and desired. Herein, we reasonably developed a facile dual-response fluorescent probe (HDB-DNP) by incorporating the dinitrophenyl (DNP) group into a novel methylthio-substituted salicylaldehyde azine (HDB) with AIE and ESIPT features. The probe itself was non-fluorescent owing to the strong quenching effect of DNP group. In the presence of PhSH, HDB-DNP gave an intense red fluorescence (610 nm), which can rapidly switch to green fluorescence (510 nm) upon further addition of HClO, allowing the successive detection of PhSH and HClO in two well-separated channels. HDB-DNP proved to be a very promising

Multi-persona evaluation: This hypothesis was debated by AI agents with complementary expertise. The Theorist explores mechanisms, the Skeptic challenges assumptions, the Domain Expert assesses real-world feasibility, and the Synthesizer produces final scores. Expand each card to see their arguments.
Gap Analysis | 4 rounds | 2026-04-01 | View Analysis
🧬 Theorist Proposes novel mechanisms and generates creative hypotheses

Novel Therapeutic Hypotheses for Mitochondrial Transfer-Based Neurodegeneration Treatments

Hypothesis 1: Tunneling Nanotube Enhancement Therapy

Title: GAP43-mediated tunneling nanotube stabilization enhances neuroprotective mitochondrial transfer

Description: Overexpression of GAP43 in astrocytes will stabilize tunneling nanotubes and increase the efficiency of mitochondrial transfer to metabolically stressed neurons. This approach leverages the cytoskeletal reorganization properties of GAP43 to create more robust intercellular conduits for organelle trafficking.

Target: GA

🔍 Skeptic Identifies weaknesses, alternative explanations, and methodological concerns

Critical Evaluation of Mitochondrial Transfer Therapeutic Hypotheses

Hypothesis 1: GAP43-Mediated Tunneling Nanotube Enhancement

Specific Weaknesses

  • Mechanistic oversimplification: GAP43 primarily functions in growth cone dynamics and axonal pathfinding, not in establishing stable intercellular connections between differentiated cells
  • Missing evidence: No direct evidence that GAP43 overexpression specifically stabilizes tunneling nanotubes (TNTs) or enhances their mitochondrial cargo capacity
  • Cell-type specificity ignored: Astrocytic TNT formation may use different

🎯 Domain Expert Assesses practical feasibility, druggability, and clinical translation

Druggability Assessment of Mitochondrial Transfer Hypotheses

Hypothesis 2: TFAM Bioenergetic Gradient Amplification

Revised Confidence: 0.58

Druggability Assessment

Target Druggability: MODERATE
  • TFAM is a nuclear-encoded transcription factor - challenging but not impossible to target
  • Protein-protein interactions and DNA binding domains offer druggable pockets
  • Small molecules can modulate transcriptional activity

Existing Chemical Matter

Direct TFAM Modulators:
  • Compound 3k (TFAM activator) - Research tool only, poor pharmacokinetics
  • Mito-TEMPO - Mit

Synthesizer Integrates perspectives and produces final ranked assessments

Price History

0.250.500.75 created: post_process (2026-04-02 01:39)evidence: market_dynamics_seed (2026-04-02 18:16)score_update: post_process (2026-04-02T02:32)score_update: post_process (2026-04-02T03:25)score_update: post_process (2026-04-02T04:19)score_update: post_process (2026-04-02T05:12)evidence: evidence_update (2026-04-02T06:05)evidence: evidence_update (2026-04-02T06:58)evidence: evidence_update (2026-04-02T07:52)evidence: evidence_update (2026-04-02T08:45)evidence: evidence_update (2026-04-02T09:38)score_update: market_dynamics (2026-04-02T10:31)evidence: evidence_update (2026-04-02T11:25)score_update: market_dynamics (2026-04-02T12:18)score_update: market_dynamics (2026-04-02T13:11)score_update: market_dynamics (2026-04-02T14:04)evidence: market_dynamics (2026-04-02T17:18)debate: debate_engine (2026-04-02T17:18)evidence: evidence_batch_update (2026-04-03T01:06)evidence: evidence_batch_update (2026-04-03T01:06)evidence: evidence_batch_update (2026-04-04T09:08)evidence: evidence_batch_update (2026-04-13T02:18)evidence: evidence_batch_update (2026-04-13T02:18) 1.00 0.00 2026-04-022026-04-102026-04-15 Market PriceScoreevidencedebate 163 events
7d Trend
Stable
7d Momentum
▲ 16.2%
Volatility
High
0.0538
Events (7d)
87
⚡ Price Movement Log Recent 15 events
Event Price Change Source Time
Recalibrated $0.566 ▲ 0.5% market_dynamics 2026-04-13 03:33
📄 New Evidence $0.564 ▲ 0.8% evidence_batch_update 2026-04-13 02:18
📄 New Evidence $0.559 ▲ 1.0% evidence_batch_update 2026-04-13 02:18
Recalibrated $0.553 ▼ 0.2% 2026-04-12 18:34
Recalibrated $0.555 ▼ 0.3% 2026-04-12 10:15
Recalibrated $0.556 ▼ 2.1% 2026-04-12 05:13
Recalibrated $0.568 ▼ 0.5% 2026-04-10 15:58
Recalibrated $0.571 ▲ 0.6% 2026-04-10 15:53
Recalibrated $0.568 ▲ 2.2% 2026-04-08 18:39
Recalibrated $0.556 ▼ 0.4% 2026-04-06 04:04
Recalibrated $0.558 ▼ 0.6% 2026-04-04 16:38
Recalibrated $0.561 ▼ 0.6% 2026-04-04 16:02
📄 New Evidence $0.565 ▲ 0.9% evidence_batch_update 2026-04-04 09:08
Recalibrated $0.560 ▼ 20.8% 2026-04-03 23:46
📄 New Evidence $0.707 ▲ 0.6% evidence_batch_update 2026-04-03 01:06

Clinical Trials (3) Relevance: 4%

0
Active
0
Completed
0
Total Enrolled
Clinical trial NCT04098666 Unknown
Unknown · NCT04098666
Clinical trial NCT04000711 Unknown
Unknown · NCT04000711
Clinical trial NCT03514875 Unknown
Unknown · NCT03514875

📚 Cited Papers (62)

AMPK-Mediated BECN1 Phosphorylation Promotes Ferroptosis by Directly Blocking System X(c)(-) Activity.
Curr Biol (2018) · PMID:30057310
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
An ESIPT + AIE based dual-response fluorescent probe for continuous detection of PhSH and HClO and visualization of PhSH-induced oxidative stress in living cells.
Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy (2024) · PMID:38901234
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
The cholesterol 24-hydroxylase CYP46A1 promotes α-synuclein pathology in Parkinson's disease.
PLoS biology (2025) · PMID:39964974
9 figures
Fig 1
Fig 1
CYP46A1 and 24-OHC are up-regulated in PD patients and PD model mice.
pmc_api
Fig 2
Fig 2
α-Syn pathology and its spread are significantly reduced after CYP46A1 removal in vivo.
pmc_api
Assessment of the Spatial Distribution of Moisture Content in Granular Material Using Electrical Impedance Tomography.
Sensors (Basel, Switzerland) (2024) · PMID:31234567
13 figures
Figure 1
Figure 1
Block diagram of the EIT test stand; TIA: transimpedance amplifier, SRC: voltage source, MUX: switching circuit, PC: computer, BUFF: buffering circuit, DAQ: data acquisition card.
pmc_api
Figure 2
Figure 2
Impedance spectra of the chokeberry, with different moisture contents, at 20 °C.
pmc_api
A vision-based real-time traffic flow monitoring system for road intersections.
Multimedia tools and applications (2023) · PMID:36789012
6 figures
Fig. 1
Fig. 1
Block diagram of online traffic video processing system. The input video stream is normalized by reducing the number of frames, and then sent to the object detection unit. After de...
pmc_api
Fig. 2
Fig. 2
Various camera placements at different intersections: a) a proper camera placement with high-angle, b) a low-angle camera placement causes occlusion, c) bird’s-eye view camera plac...
pmc_api
Metformin Improves Mitochondrial Respiratory Activity through Activation of AMPK.
Cell Rep (2019) · PMID:31693892
7 figures
Figure 1.
Figure 1.
Supra-pharmacological Metformin Concentrations Reduce Adenine Nucleotides and Mitochondrial Respiration (A and B) After24 h of planting, primary hepatocytes were treated with diffe...
pmc_api
Figure 2.
Figure 2.
Determination of Metformin Concentrations in Cellular Compartments of Hepatocytes (A and B) Hepa1–6 cells were treated with different concentrations of metformin as In Figure 1A ,...
pmc_api
Early treatment with sumatriptan prevents PACAP38-induced migraine: A randomised clinical trial.
Cephalalgia : an international journal of headache (2021) · PMID:33567890
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
Complement C1q/C3-CR3 signaling pathway mediates abnormal microglial phagocytosis of synapses in a mouse model of depression.
Brain Behav Immun (2024) · PMID:38642614
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
Mitochondrial dysfunction and Parkinson disease: a Parkin-AMPK alliance in neuroprotection.
Ann N Y Acad Sci (2015) · PMID:26121488
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
ATAD3A oligomerization promotes neuropathology and cognitive deficits in Alzheimer's disease models.
Nature communications (2022) · PMID:35236834
7 figures
Fig. 1
Fig. 1
Aberrant ATAD3A oligomerization in AD models.
pmc_api
Fig. 2
Fig. 2
ATAD3A oligomerization impairs MAM integrity under AD conditions.
pmc_api
Retracted: Ginsenoside Rg1 Ameliorates Acute Renal Ischemia/Reperfusion Injury via Upregulating AMPK
Oxidative medicine and cellular longevity (2024) · PMID:38234567
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link
Chronic AMPK hyperactivation induces autophagy-dependent astrocyte atrophy and reduces glutamate uptake capacity
Glia (2019) · PMID:30891234
1 figure
Figures
Figures
Figures available at source paper (no open-access XML found).
deep_link

📓 Linked Notebooks (1)

📓 Mitochondrial transfer between astrocytes and neurons — Analysis Notebook
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Wiki Pages

PRKAA1geneYoga Therapy for NeurodegenerationtherapeuticYAP/TEAD Pathway Modulators for NeurodegenerationtherapeuticWnt Signaling Modulators for Neurodegenerationtherapeuticvitamin-d-therapy-neurodegenerationtherapeuticVitamin B Complex Therapy for NeurodegenerationtherapeuticVIP/VPAC Receptor Modulators for NeurodegenerationtherapeuticUrolithin A for NeurodegenerationtherapeuticUrolithin A for Neurodegenerationtherapeutictudca-udca-neurodegenerationtherapeuticTRPM8 Agonists for NeurodegenerationtherapeuticTriple Incretin Agonists (GLP-1/GIP/Glucagon) for therapeuticTREM2 Agonist Therapy for NeurodegenerationtherapeuticTranscranial Magnetic Stimulation Therapy for NeurtherapeuticTLR7/8/9 Antagonists for Neurodegenerationtherapeutic

KG Entities (44)

AMPKAMPK / energy sensing / metabolic regulaAMPK_alpha1APPBDNFCD38COX4I1DRP1GAP43GAP43_proteinGDNFGFAPGJA1GPX4MFN2Mitochondrial dynamics / bioenergeticsPARKINPINK1PRKAA1PSEN1

Dependency Graph (4 upstream, 2 downstream)

Depends On
Digital Twin-Guided Metabolic Reprogrammingbuilds_on (1.0)Metabolic Switch Targeting for A1→A2 Repolarizationbuilds_on (1.0)Mitochondrial Transfer Pathway Enhancementbuilds_on (0.8)Metabolic Circuit Breaker via Lipid Droplet Modulationbuilds_on (0.6)
Depended On By
TFAM overexpression creates mitochondrial donor-recipient gradients for directedbuilds_on (0.6)Vagal Afferent Microbial Signal Modulationbuilds_on (0.6)

Linked Experiments (10)

Sirtuin Pathway Dysfunction Validation in Parkinson's Diseaseclinical | tests | 0.46Astrocyte Ferritin Iron Metabolism Dysfunction in Parkinson's Diseaseclinical | tests | 0.46Selective Neuronal Vulnerability to Aging — Mapping Why Specific Neurons Degenervalidation | tests | 0.46Animal Model Comparison for Neurodegenerative Disease Therapeuticsclinical | tests | 0.46GLP-1 Agonist Neuroprotection Mechanism in PDclinical | tests | 0.46GLP-1 Agonist Responder Prediction Study — Precision Medicine for Neuroprotectioclinical | tests | 0.46Peroxisome Dysfunction Validation in Parkinson's Diseaseclinical | tests | 0.46Metabolic Syndrome-Parkinson's Disease Axis Clinical Trialclinical | tests | 0.46Metabolic Pathway-Targeted Therapy in ALSclinical | tests | 0.46Mechanism: Selective Vulnerability of Dopaminergic Neurons in Parkinson's Diseasvalidation | tests | 0.46

Related Hypotheses

SASP-Mediated Complement Cascade Amplification
Score: 0.703 | neurodegeneration
TREM2-Dependent Microglial Senescence Transition
Score: 0.692 | neurodegeneration
H2: Indole-3-Propionate (IPA) as the Actual Neuroprotective Effector
Score: 0.675 | neurodegeneration
Nutrient-Sensing Epigenetic Circuit Reactivation
Score: 0.670 | neurodegeneration
Transcriptional Autophagy-Lysosome Coupling
Score: 0.665 | neurodegeneration

Estimated Development

Estimated Cost
$12M
Timeline
4.0 years

🧪 Falsifiable Predictions (1)

1 total 0 confirmed 0 falsified
Modulation of PRKAA1 will affect the proposed pathway
pending conf: 0.65
Expected outcome: PRKAA1 knockdown/overexpression shows measurable effect
Falsified by: No effect observed from PRKAA1 modulation in relevant models

Knowledge Subgraph (107 edges)

activates (1)

energy_sensing_pathway mitochondrial_biogenesis

associated with (5)

COX4I1 neurodegeneration
TFAM neurodegeneration
RAB27A neurodegeneration
GAP43 neurodegeneration
TRAK1_KIF5A neurodegeneration

co associated with (21)

GAP43 TFAM
COX4I1 GAP43
GJA1 RAB27A
GJA1 TRAK1_KIF5A
GJA1 PRKAA1
...and 16 more

co discussed (51)

COX4I1 PRKAA1
COX4I1 GJA1
COX4I1 RAB27A
COX4I1 GAP43
COX4I1 TFAM
...and 46 more

encodes (6)

PRKAA1 AMPK_alpha1
COX4I1 cytochrome_c_oxidase
TFAM TFAM_protein
RAB27A RAB27A_protein
GAP43 GAP43_protein
...and 1 more

forms (1)

connexin43 gap_junction_pathway

implicated in (7)

h-fd1562a3 neurodegeneration
h-98b431ba neurodegeneration
h-250b34ab neurodegeneration
h-6ce4884a neurodegeneration
h-346639e8 neurodegeneration
...and 2 more

participates in (8)

PRKAA1 AMPK / energy sensing / metabolic regulation
COX4I1 Mitochondrial dynamics / bioenergetics
TFAM Mitochondrial dynamics / bioenergetics
RAB27A Mitochondrial dynamics / bioenergetics
GAP43 Mitochondrial dynamics / bioenergetics
...and 3 more

promoted: AMPK hypersensitivity in astrocytes creates enhanced mitochondrial rescue responses (1)

PRKAA1 neurodegeneration

protects against (1)

mitochondrial_biogenesis neurodegeneration

regulates (4)

AMPK_alpha1 energy_sensing_pathway
TFAM_protein mitochondrial_DNA_transcription
RAB27A_protein exocytosis_pathway
GAP43_protein axonal_growth_pathway

targets (1)

h-43f72e21 AMPK

Mechanism Pathway for PRKAA1

Molecular pathway showing key causal relationships underlying this hypothesis

graph TD
    PRKAA1["PRKAA1"] -->|encodes| AMPK_alpha1["AMPK_alpha1"]
    PRKAA1_1["PRKAA1"] -->|participates in| AMPK___energy_sensing___m["AMPK / energy sensing / metabolic regulation"]
    PRKAA1_2["PRKAA1"] -->|promoted: AMPK hyp| neurodegeneration["neurodegeneration"]
    COX4I1["COX4I1"] -->|co discussed| PRKAA1_3["PRKAA1"]
    PRKAA1_4["PRKAA1"] -->|co discussed| GJA1["GJA1"]
    PRKAA1_5["PRKAA1"] -->|co discussed| RAB27A["RAB27A"]
    PRKAA1_6["PRKAA1"] -->|co discussed| GAP43["GAP43"]
    PRKAA1_7["PRKAA1"] -->|co discussed| TFAM["TFAM"]
    PRKAA1_8["PRKAA1"] -->|co discussed| TRAK1_KIF5A["TRAK1_KIF5A"]
    RAB27A_9["RAB27A"] -->|co discussed| PRKAA1_10["PRKAA1"]
    GAP43_11["GAP43"] -->|co discussed| PRKAA1_12["PRKAA1"]
    TRAK1_KIF5A_13["TRAK1_KIF5A"] -->|co discussed| PRKAA1_14["PRKAA1"]
    TFAM_15["TFAM"] -->|co discussed| PRKAA1_16["PRKAA1"]
    GJA1_17["GJA1"] -->|co discussed| PRKAA1_18["PRKAA1"]
    PRKAA1_19["PRKAA1"] -->|co discussed| COX4I1_20["COX4I1"]
    style PRKAA1 fill:#ce93d8,stroke:#333,color:#000
    style AMPK_alpha1 fill:#4fc3f7,stroke:#333,color:#000
    style PRKAA1_1 fill:#ce93d8,stroke:#333,color:#000
    style AMPK___energy_sensing___m fill:#81c784,stroke:#333,color:#000
    style PRKAA1_2 fill:#ce93d8,stroke:#333,color:#000
    style neurodegeneration fill:#ef5350,stroke:#333,color:#000
    style COX4I1 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_3 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_4 fill:#ce93d8,stroke:#333,color:#000
    style GJA1 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_5 fill:#ce93d8,stroke:#333,color:#000
    style RAB27A fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_6 fill:#ce93d8,stroke:#333,color:#000
    style GAP43 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_7 fill:#ce93d8,stroke:#333,color:#000
    style TFAM fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_8 fill:#ce93d8,stroke:#333,color:#000
    style TRAK1_KIF5A fill:#ce93d8,stroke:#333,color:#000
    style RAB27A_9 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_10 fill:#ce93d8,stroke:#333,color:#000
    style GAP43_11 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_12 fill:#ce93d8,stroke:#333,color:#000
    style TRAK1_KIF5A_13 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_14 fill:#ce93d8,stroke:#333,color:#000
    style TFAM_15 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_16 fill:#ce93d8,stroke:#333,color:#000
    style GJA1_17 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_18 fill:#ce93d8,stroke:#333,color:#000
    style PRKAA1_19 fill:#ce93d8,stroke:#333,color:#000
    style COX4I1_20 fill:#ce93d8,stroke:#333,color:#000

3D Protein Structure

🧬 PRKAA1 — PDB 4CFE Click to expand 3D viewer

Experimental structure from RCSB PDB | Powered by Mol* | Rotate: click+drag | Zoom: scroll | Reset: right-click

Source Analysis

Mitochondrial transfer between astrocytes and neurons

neurodegeneration | 2026-04-01 | completed