gene

TFAM

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about TFAM: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

837Connections
1Hypotheses
3Analyses
50Outgoing
50Incoming

Summary

TFAM is a gene implicated in neurodegeneration research. Key relationships include: activates, inhibits, regulates. Associated with ALS, Aging, Als. Connected to 395 entities in the SciDEX knowledge graph.

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🧬 Gene Info
Gene SymbolTFAM
Chromosome10q21.1
Protein TypeTranscription Factor
Target ClassTranscription Factor
FunctionDrugs targeting TFAM would enhance or modulate its transcriptional activity to increase mitochondrial DNA replication and gene expression, thereby boosting mitochondrial biogenesis and ATP producti...
Mechanism of ActionDrugs targeting TFAM would enhance or modulate its transcriptional activity to increase mitochondrial DNA replication and gene expression, thereby boosting mitochondrial biogenesis and ATP production. Alternatively, indirect approaches activate upstream regulators like PGC-1α and SIRT1 to increase TFAM expression and activity.
DruggabilityMedium (0.50)
Clinical StageApproved
Molecular Weight26 kDa
Amino Acids246 aa
Exons9
PathwaysApoptosis, Ferroptosis, Metastasis, Mitochondrial Function, Mitophagy
UniProt IDQ6LES8
GeneCardsTFAM
Human Protein AtlasTFAM
Associated DiseasesALS, ALZHEIMER, Aging, Carcinoma, INFLAMMATION
Known Drugs/CompoundsCytoplasmic Mitochondrial DNA, Mitochondrial DNA, Mitochondrial Dna, Cytoplasmic Mitochondrial Dna, resveratrol, RAPAMYCIN
InteractionsHK2, LC3, SIRT3, EGFR, NRF1, NRF2
SciDEX TargetView Target Profile (8 clinical trials)
SciDEX HypothesesTFAM overexpression creates mitochondrial donor-re
KG Connections837 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING
🧬 3D Structure: TFAM — PDB 3TMM Click to expand

Experimental structure from RCSB PDB | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

TFAM Gene

gene · 3249 words

cbs-psp-daily-action-plan

therapeutic · 30834 words

NRF2 Oxidative Stress Pathway

mechanism · 5315 words

Mitochondrial Quality Control

mechanism · 5069 words

Mitochondrial Dysfunction in Neurodegeneration

mechanism · 4363 words

Insulin Signaling in Parkinson's Disease

mechanism · 4072 words

Pathway Diagram

flowchart TD
    TFAM["TFAM<br/>(Transcription Factor A,<br/>Mitochondrial)"]
    
    MitoBio["Mitochondrial<br/>Biogenesis"]
    MitoFunc["Mitochondrial<br/>Function"]
    MitoDys["Mitochondrial<br/>Dysfunction"]
    
    Neuroinflam["Neuroinflammation"]
    Inflammation["Systemic<br/>Inflammation"]
    
    ALS["Amyotrophic Lateral<br/>Sclerosis (ALS)"]
    PD["Parkinson's<br/>Disease"]
    MS["Multiple<br/>Sclerosis"]
    Neurodegeneration["Neurodegeneration"]
    
    Aging["Cellular<br/>Aging"]
    Ischemia["Cerebral<br/>Ischemia"]
    
    OxStress["Oxidative<br/>Stress"]
    EnergyDeficit["ATP/Energy<br/>Deficit"]
    
    TherapyTarget["Therapeutic<br/>Target"]
    
    TFAM --|"activates"|--> MitoBio
    TFAM --|"enhances"|--> MitoFunc
    MitoFunc --|"dysfunction leads to"|--> MitoDys
    
    MitoDys --|"causes"|--> OxStress
    MitoDys --|"results in"|--> EnergyDeficit
    
    TFAM --|"regulates"|--> Neuroinflam
    TFAM --|"regulates"|--> Inflammation
    
    OxStress --|"promotes"|--> Neuroinflam
    EnergyDeficit --|"contributes to"|--> Neurodegeneration
    
    TFAM --|"protective against"|--> ALS
    TFAM --|"therapeutic target"|--> PD
    TFAM --|"inhibits"|--> MS
    TFAM --|"associated with"|--> Neurodegeneration
    
    Neuroinflam --|"drives"|--> ALS
    Neuroinflam --|"contributes to"|--> PD
    
    TFAM --|"inhibits"|--> Ischemia
    TFAM --|"associated with"|--> Aging
    
    TFAM --|"represents"|--> TherapyTarget
    
    style TFAM fill:#006494
    style MitoBio fill:#1b5e20
    style MitoFunc fill:#1b5e20
    style TherapyTarget fill:#1b5e20
    style MitoDys fill:#ef5350
    style Neuroinflam fill:#ef5350
    style Inflammation fill:#ef5350
    style OxStress fill:#ef5350
    style EnergyDeficit fill:#ef5350
    style ALS fill:#5d4400
    style PD fill:#5d4400
    style MS fill:#5d4400
    style Neurodegeneration fill:#5d4400
    style Aging fill:#5d4400
    style Ischemia fill:#5d4400

Outgoing (447)

TargetRelationTypeStr
Oxidative Stressactivatespathway1.00
Cytoplasmic Mitochondrial DNAbindscompound0.95
mtDNA Maintenancemediatesprocess0.95
Mitochondrial Dnabindscompound0.95
Cytoplasmic Mitochondrial Dnabindscompound0.95

Incoming (390)

SourceRelationTypeStr
Mtrossuppressescompound0.92
mtROSdownregulatesprocess0.90
h-98b431batargets_genehypothesis0.90
h-7c3c0f40targets_genehypothesis0.90
h-28d5b559targets_genehypothesis0.90

Targeting Hypotheses (1)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
TFAM overexpression creates mitochondrial donor-recipient gr 0.474 neurodegeneration Mitochondrial transfer between astrocyte

Mentioning Analyses (3)

Scientific analyses that reference this entity

CRISPR-based therapeutic approaches for neurodegenerative diseases

neurodegeneration | 2026-04-03 | 14 hypotheses Top: 0.622

Cell type vulnerability in Alzheimers Disease (SEA-AD transcriptomic data)

neurodegeneration | 2026-04-03 | 17 hypotheses Top: 0.662

Mitochondrial transfer between astrocytes and neurons

neurodegeneration | 2026-04-01 | 7 hypotheses Top: 0.570

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
Melatonin attenuates sepsis-induced acute kidney injury by promoting mitophagy t [PMID:37651673] Deng Z, He M, Hu H, Zhang W, Zhang Y, Ge Autophagy 2024 1
TFAM is an autophagy receptor that limits inflammation by binding to cytoplasmic [PMID:38783142] Liu H, Zhen C, Xie J, Luo Z, Zeng L, Zha Nat Cell Biol 2024 1
Mitochondrial-derived damage-associated molecular patterns amplify neuroinflamma [PMID:35233090] Lin MM, Liu N, Qin ZH, Wang Y Acta Pharmacol Sin 2022 1
Mitochondrial ROS promote mitochondrial dysfunction and inflammation in ischemic [PMID:33408785] Zhao M, Wang Y, Li L, Liu S, Wang C, Yua Theranostics 2021 1
Mitochondrial DNA copy number in human disease: the more the better? [PMID:33314045] Filograna R, Mennuni M, Alsina D, Larsso FEBS Lett 2021 1
Mitochondrial DNA stress triggers autophagy-dependent ferroptotic death. [PMID:32186434] Li C, Zhang Y, Liu J, Kang R, Klionsky D Autophagy 2021 1
Butyrate extends health and lifespan in mice with mitochondrial deficiency. [PMID:41826362] ["Gaband\u00e9-Rodr\u00edguez E", "G\u00 Nature communications 2026 0
Vav-iCre-Mediated Deletion of TFAM Is Not Recoverable and Is Consistent with Emb [PMID:41898789] ["Ghosh R", "Shakur E", "Yousefzadeh M"] Genes 2026 0
NRIP1 co-activates nuclear translocated FOXO3 to upregulate TFAM expression and [PMID:41888517] ["Zha Y", "Huang H", "Liu Y", "Wan M", " Cell death discovery 2026 0
miR-137-5p-Loaded Milk-Derived Small Extracellular Vesicles Modulate Oxidative S [PMID:41754992] ["G\u00f6n\u00fcll\u00fc S", "Ayd\u0131n Pharmaceutics 2026 0
Ginseng stem and leaf saponins attenuates pulmonary fibrosis by regulating TFAM- [PMID:41911987] Chen Y, Hu L, Fu Q, Chen H, Jiang Z, Li Journal of ethnopharmacology 2026 0
NIPSNAP3B elevates mitochondrial biogenesis to attenuate lipid accumulation in c [PMID:41587668] Li K, Wang M, Liu Y, Lu R, Zhang H et al Gene 2026 0
Icariin, astragaloside IV and puerarin mixture salvages synaptic loss by enhanci [PMID:41934898] Zhong J, He X, Yang H, Zhang J, Liu J et Biomed Pharmacother 2026 0
Structural Analysis of Human LonP1 Protease Bound with the Native Substrate. [PMID:41900996] Li M, Liu H, Zhang S, Gao Q, Li S, Wang Life (Basel, Switzerland) 2026 0
Effect of (-)-Epicatechin on Mitochondrial Homeostasis in Skeletal Muscle of Fem [PMID:41900149] Herrera-Cogco EC, Herrera-Meza S, Martín Molecules (Basel, Switzerland) 2026 0
Enhancing the Optical Properties of MAPbI3 Perovskites Passivated with Coordinat [PMID:41908442] Gamarde M, Jouaiti A, Chartrand D, Antho ACS omega 2026 0
Butyrate extends health and lifespan in mice with mitochondrial deficiency. [PMID:41648569] ["Gaband\u00e9-Rodr\u00edguez E", "G\u00 bioRxiv : the preprint server 2026 0
PM [PMID:41897431] ["Somayajulu M", "Wright R", "Muhammed F Antioxidants (Basel, Switzerla 2026 0
m6A deficiency induces dopaminergic neurodegeneration and progressive parkinsoni [PMID:41842966] ["Liu S", "Ren Q", "Mo G", "Li Z", "Huan The Journal of clinical invest 2026 0
In vitro investigation of miR-206-3p-loaded extracellular vesicles as modulators [PMID:41592400] ["G\u00f6n\u00fcll\u00fc S", "Ayd\u0131n Biochemical and biophysical re 2026 0