gene

SF3B1

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about SF3B1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

177Connections
0Hypotheses
0Analyses
50Outgoing
50Incoming

Summary

SF3B1 is a gene implicated in neurodegeneration research. Key relationships include: therapeutic target, activates, inhibits. Associated with AD, ALI, ALS. Connected to 118 entities in the SciDEX knowledge graph.

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🧬 Gene Info
Gene SymbolSF3B1
Full NameSplicing Factor 3b Subunit 1
Chromosome2q33.1
Functionis a gene located on chromosome 2q33.
Primary Expressionall cell types at moderate to high levels - Nuclear localization: The protein localizes to the nucleus, particularly the nucleolus - High turnov
Molecular Weight146 kDa
Amino Acids1308 aa
Exons25
Gene TypeProtein coding
PathwaysEpigenetic, Immune Response, epigenetic regulation, inflammation
UniProt IDO75533
NCBI Gene ID6762
Ensembl IDENSG00000115523
GeneCardsSF3B1
Human Protein AtlasSF3B1
Associated DiseasesAD, ALI, AMI, Als, Alzheimer, Cancer
InteractionsTET2, TP53, DNMT3A, U2AF1, ASXL1, APOB
KG Connections177 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: SF3B1 — AlphaFold O75533 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

SF3B1

gene · 2602 words

psp-tauopathy

mechanism · 4377 words

PTBP2 - Polypyrimidine Tract Binding Protein 2

gene · 3381 words

Spliceosome and Neurodegeneration

mechanism · 2890 words

RNA Splicing Defects in Neurodegeneration

mechanism · 2856 words

eef1a1

gene · 2617 words

Pathway Diagram

graph TD
    SF3B1["SF3B1"]
    SF3B1 -->|"target for"| Cancer["Cancer"]
    SF3B1 -->|"target for"| Carcinoma["Carcinoma"]
    SF3B1 -->|"target for"| Ms["Ms"]
    SF3B1 -->|"target for"| Als["Als"]
    SF3B1 -->|"target for"| Cardiovascular["Cardiovascular"]
    SF3B1 -->|"activates"| Inflammation["Inflammation"]
    SF3B1 -->|"target for"| Alzheimer["Alzheimer"]
    SF3B1 -->|"target for"| Heart_Failure["Heart Failure"]
    SF3B1 -->|"target for"| Tumor["Tumor"]
    SF3B1 -->|"inhibits"| ALS["ALS"]
    IDH1["IDH1"] -->|"target for"| SF3B1
    VEGFA["VEGFA"] -->|"target for"| SF3B1
    MDM4["MDM4"] -->|"target for"| SF3B1
    APOB["APOB"] -->|"target for"| SF3B1
    ASXL1["ASXL1"] -->|"activates"| SF3B1
    DNMT3A["DNMT3A"] -->|"activates"| SF3B1
    FAS["FAS"] -->|"target for"| SF3B1
    JUN["JUN"] -->|"inhibits"| SF3B1
    MET["MET"] -->|"inhibits"| SF3B1

Outgoing (122)

TargetRelationTypeStr
ds-83b31ef18d49provides_data_fordataset1.00
Immune Responsesmodifiesprocess0.80
Immune Responsemodulatesprocess0.80
Immune Cell Functionmodulatesprocess0.78
Cancertherapeutic_targetdisease0.75

Incoming (55)

SourceRelationTypeStr
ds-83b31ef18d49data_indataset1.00
IDH1therapeutic_targetgene0.60
VEGFAtherapeutic_targetgene0.60
MDM4therapeutic_targetgene0.60
APOBtherapeutic_targetgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found