gene

VAMP7

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about VAMP7: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

158Connections
0Hypotheses
0Analyses
50Outgoing
50Incoming

Summary

VAMP7 (Vesicle-Associated Membrane Protein 7, also TI-VAMP) is a longin domain-containing SNARE protein essential for synaptic vesicle trafficking, lysosomal fusion, and autophagy. Implicated in Alzheimer's disease, Parkinson's disease, and Hermansky-Pudlak syndrome.

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🧬 Gene Info
Gene SymbolVAMP7
Full NameVesicle-Associated Membrane Protein 7
AliasesVesicle-Associated Membrane Protein 7, also TI-VAMP
ChromosomeXq28
Functionis a member of the SNARE (Soluble N-ethylmaleimide-sensitive factor Attachment Protein Receptor) family.
Amino Acids219 aa
Exons13
PathwaysAutophagy, Lysosomal Degradation, Mitophagy
UniProt IDQ9UBW5
NCBI Gene ID6845
Ensembl IDENSG00000125459
OMIM300301
GeneCardsVAMP7
Human Protein AtlasVAMP7
Alternative NamesTI-VAMP, SYBL1
Associated DiseasesALS, Ms
Known Drugs/Compoundsrapamycin
InteractionsCXCR4, LAMP2, UBIQUITIN, RAB7A, GABARAP, DNM1L
KG Connections158 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: VAMP7 — AlphaFold Q9UBW5 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

VAMP7 Gene

gene · 2288 words

Mitochondria-Lysosome Contact Site Dysfunction in Parkinson's Disease

hypothesis · 2969 words

STX2 — Syntaxin 2

gene · 2774 words

STX12 - Syntaxin 12

gene · 2493 words

RAB39B Gene

gene · 2455 words

STX16 - Syntaxin 16

gene · 2182 words

Pathway Diagram

graph TD
    VAMP7["<b>VAMP7</b>"]
    Ms{"Ms"}
    VAMP7 -->|"associated with"| Ms
    Als{"Als"}
    VAMP7 -->|"associated with"| Als
    ALS{"ALS"}
    VAMP7 -->|"associated with"| ALS
    STX17["STX17"]
    VAMP7 -->|"associated with"| STX17
    RAB7A["RAB7A"]
    VAMP7 -->|"associated with"| RAB7A
    SNAP29["SNAP29"]
    VAMP7 -->|"associated with"| SNAP29
    GABARAPL1["GABARAPL1"]
    VAMP7 -->|"associated with"| GABARAPL1
    MAP1LC3B["MAP1LC3B"]
    VAMP7 -->|"associated with"| MAP1LC3B
    RB1["RB1"]
    VAMP7 -->|"associated with"| RB1
    PRKN["PRKN"]
    VAMP7 -->|"associated with"| PRKN
    RB1CC1["RB1CC1"]
    VAMP7 -->|"associated with"| RB1CC1
    Lysosomal_Degradation(["Lysosomal Degradation"])
    VAMP7 -->|"associated with"| Lysosomal_Degradation
    GABARAP["GABARAP"]
    GABARAP -->|"associated with"| VAMP7
    VAMP8["VAMP8"]
    VAMP8 -->|"associated with"| VAMP7
    RTN3["RTN3"]
    RTN3 -->|"associated with"| VAMP7
    LAMP2["LAMP2"]
    LAMP2 -->|"associated with"| VAMP7
    DNM1L["DNM1L"]
    DNM1L -->|"associated with"| VAMP7
    ULK1["ULK1"]
    ULK1 -->|"associated with"| VAMP7
    LC3["LC3"]
    LC3 -->|"associated with"| VAMP7
    MTOR["MTOR"]
    MTOR -->|"associated with"| VAMP7
    RAB2A["RAB2A"]
    RAB2A -->|"associated with"| VAMP7
    MAP1LC3B -->|"associated with"| VAMP7
    PRKN -->|"associated with"| VAMP7
    RB1 -->|"associated with"| VAMP7
    style VAMP7 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (86)

TargetRelationTypeStr
Autophagosome-Lysosome Fusionmediatesprocess0.95
Autophagosome-Lysosome Fusioninvolved_inprocess0.90
Msassociated_withdisease0.65
Alsassociated_withdisease0.65
ALSassociated_withdisease0.65

Incoming (72)

SourceRelationTypeStr
GABARAPassociated_withgene0.60
VAMP8associated_withgene0.60
RTN3associated_withgene0.60
LAMP2associated_withgene0.60
DNM1Lassociated_withgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found