Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about RTN3: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
RTN3 (Reticulon 3): ER morphogenesis protein involved in autophagy, APP processing, and neurodegenerative diseases including Alzheimer's and Huntington's disease
| Gene Symbol | RTN3 |
| Full Name | Reticulon 3 |
| Aliases | Reticulon-3 |
| Chromosome | 6p22.3 |
| Function | is a member of the reticulon family of membrane proteins primarily localized to the endoplasmic reticulum (ER). |
| Subcellular Localization | the endoplasmic reticulum (ER). RTN3 plays critical roles in ER morphology, autophagosome formation, and protein quality |
| Amino Acids | 200 aa |
| Pathways | mTOR, mtor |
| UniProt ID | Q9Y3I0 |
| NCBI Gene ID | 10318 |
| Ensembl ID | ENSG00000148681 |
| OMIM | 604258 |
| GeneCards | RTN3 |
| Human Protein Atlas | RTN3 |
| Associated Diseases | AD, ALI, ALS, Alzheimer, Ms |
| Known Drugs/Compounds | rapamycin |
| Interactions | SESN2, CANX, MIRO1, EIF2S1, CAT, LC3 |
| KG Connections | 533 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
graph TD
RTN3["RTN3"] -->|"Interacts With"| Dementia["Dementia"]
RTN3["RTN3"] -->|"Interacts With"| Cardiovascular["Cardiovascular"]
RTN3["RTN3"] -->|"Interacts With"| Als["Als"]
RTN3["RTN3"] -->|"Interacts With"| Alzheimer["Alzheimer"]
RTN3["RTN3"] -->|"Interacts With"| Parkinson["Parkinson"]
RTN3["RTN3"] -->|"Interacts With"| Ms["Ms"]
RTN3["RTN3"] -->|"Interacts With"| Amyotrophic_Lateral_Sclerosis["Amyotrophic Lateral Sclerosis"]
RTN3["RTN3"] -->|"Interacts With"| Frontotemporal_Dementia["Frontotemporal Dementia"]
CAT["CAT"] -->|"Interacts With"| RTN3["RTN3"]
OPTN["OPTN"] -->|"Interacts With"| RTN3["RTN3"]
DNM1L["DNM1L"] -->|"Interacts With"| RTN3["RTN3"]
CANX["CANX"] -->|"Interacts With"| RTN3["RTN3"]
LGALS3["LGALS3"] -->|"Interacts With"| RTN3["RTN3"]
style RTN3 fill:#8d4900,color:#e0e0e0
style Dementia fill:#b71c1c,color:#e0e0e0
style Cardiovascular fill:#b71c1c,color:#e0e0e0
style Als fill:#b71c1c,color:#e0e0e0
style Alzheimer fill:#b71c1c,color:#e0e0e0
style Parkinson fill:#b71c1c,color:#e0e0e0
style Ms fill:#b71c1c,color:#e0e0e0
style Amyotrophic_Lateral_Sclerosis fill:#b71c1c,color:#e0e0e0
style Frontotemporal_Dementia fill:#b71c1c,color:#e0e0e0
style CAT fill:#8d4900,color:#e0e0e0
style OPTN fill:#8d4900,color:#e0e0e0
style DNM1L fill:#8d4900,color:#e0e0e0
style CANX fill:#8d4900,color:#e0e0e0
style LGALS3 fill:#8d4900,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| autophagy pathway | participates_in | pathway | 0.70 |
| ubiquitin-proteasome | participates_in | pathway | 0.70 |
| Dementia | interacts_with | disease | 0.65 |
| Cardiovascular | interacts_with | disease | 0.65 |
| Als | interacts_with | disease | 0.65 |
| Alzheimer | interacts_with | disease | 0.65 |
| Parkinson | interacts_with | disease | 0.65 |
| Ms | interacts_with | disease | 0.65 |
| Ms | associated_with | disease | 0.65 |
| Als | associated_with | disease | 0.65 |
| Amyotrophic Lateral Sclerosis | interacts_with | disease | 0.65 |
| Cardiovascular | therapeutic_target | disease | 0.65 |
| Frontotemporal Dementia | interacts_with | disease | 0.65 |
| Ftd | interacts_with | disease | 0.65 |
| ALS | interacts_with | disease | 0.65 |
| ALS | associated_with | disease | 0.65 |
| SESN2 | interacts_with | gene | 0.60 |
| LAMP2 | associated_with | gene | 0.60 |
| DNM1L | associated_with | gene | 0.60 |
| ULK1 | associated_with | gene | 0.60 |
| LC3 | associated_with | gene | 0.60 |
| MTOR | associated_with | gene | 0.60 |
| RAB2A | associated_with | gene | 0.60 |
| VAMP7 | associated_with | gene | 0.60 |
| STX17 | associated_with | gene | 0.60 |
| RAB7A | associated_with | gene | 0.60 |
| SNAP29 | associated_with | gene | 0.60 |
| GABARAPL1 | associated_with | gene | 0.60 |
| MAP1LC3B | associated_with | gene | 0.60 |
| RB1 | associated_with | gene | 0.60 |
| PRKN | associated_with | gene | 0.60 |
| RB1CC1 | associated_with | gene | 0.60 |
| CANX | interacts_with | gene | 0.60 |
| MIRO1 | interacts_with | gene | 0.60 |
| EIF2S1 | interacts_with | gene | 0.60 |
| CAT | interacts_with | gene | 0.60 |
| LC3 | interacts_with | gene | 0.60 |
| NBR1 | interacts_with | gene | 0.60 |
| SQSTM1 | interacts_with | gene | 0.60 |
| DISC1 | interacts_with | gene | 0.60 |
| CHOP | interacts_with | gene | 0.60 |
| BNIP3 | interacts_with | gene | 0.60 |
| PINK1 | interacts_with | gene | 0.60 |
| LGALS3 | interacts_with | gene | 0.60 |
| FIP200 | interacts_with | gene | 0.60 |
| FUNDC1 | interacts_with | gene | 0.60 |
| LMNA | interacts_with | gene | 0.60 |
| UBIQUITIN | associated_with | gene | 0.60 |
| VAMP8 | associated_with | gene | 0.60 |
| GABARAP | associated_with | gene | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| RB1 | activates | gene | 0.70 |
| ATG | activates | gene | 0.70 |
| CAT | interacts_with | gene | 0.60 |
| OPTN | interacts_with | gene | 0.60 |
| DNM1L | interacts_with | gene | 0.60 |
| CANX | interacts_with | gene | 0.60 |
| LGALS3 | interacts_with | gene | 0.60 |
| CALCOCO2 | interacts_with | gene | 0.60 |
| G3BP1 | interacts_with | gene | 0.60 |
| PEX3 | interacts_with | gene | 0.60 |
| SQSTM1 | interacts_with | gene | 0.60 |
| BCL2 | interacts_with | gene | 0.60 |
| LMNA | interacts_with | gene | 0.60 |
| STING1 | interacts_with | gene | 0.60 |
| TAX1BP1 | interacts_with | gene | 0.60 |
| ATM | interacts_with | gene | 0.60 |
| SNCAIP | interacts_with | gene | 0.60 |
| RB1CC1 | interacts_with | gene | 0.60 |
| MFN1 | interacts_with | gene | 0.60 |
| ERN1 | interacts_with | gene | 0.60 |
| PARKIN | interacts_with | gene | 0.60 |
| FMR1 | interacts_with | gene | 0.60 |
| SNCA | interacts_with | gene | 0.60 |
| FAM134B | interacts_with | gene | 0.60 |
| LC3 | interacts_with | gene | 0.60 |
| EPAS1 | interacts_with | gene | 0.60 |
| MIRO1 | interacts_with | gene | 0.60 |
| CTSD | interacts_with | gene | 0.60 |
| RB1 | interacts_with | gene | 0.60 |
| EIF2AK3 | interacts_with | gene | 0.60 |
| PRKN | interacts_with | gene | 0.60 |
| BCL2L11 | interacts_with | gene | 0.60 |
| MUL1 | interacts_with | gene | 0.60 |
| BNIP3 | interacts_with | gene | 0.60 |
| DISC1 | interacts_with | gene | 0.60 |
| EIF2S1 | interacts_with | gene | 0.60 |
| RIPK3 | interacts_with | gene | 0.60 |
| DRP1 | interacts_with | gene | 0.60 |
| CHOP | interacts_with | gene | 0.60 |
| BECN1 | interacts_with | gene | 0.60 |
| PTEN | interacts_with | gene | 0.60 |
| DDIT3 | interacts_with | gene | 0.60 |
| NBR1 | interacts_with | gene | 0.60 |
| EMD | interacts_with | gene | 0.60 |
| MAPK8 | interacts_with | gene | 0.60 |
| RHOT1 | interacts_with | gene | 0.60 |
| BNIP3L | interacts_with | gene | 0.60 |
| NDP52 | interacts_with | gene | 0.60 |
| HIF1A | interacts_with | gene | 0.60 |
| MAP1LC3B | interacts_with | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||