Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about ubiquitin-proteasome: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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Knowledge base pages for this entity
graph TD
ubiquitin_proteasome["ubiquitin-proteasome"] -->|"mediates"| protein_misfolding["protein misfolding"]
style protein_misfolding fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
ubiquitin_proteasome["ubiquitin-proteasome"] -->|"crosstalk with"| unfolded_protein_response["unfolded protein response"]
style unfolded_protein_response fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
ubiquitin_proteasome["ubiquitin-proteasome"] -->|"active in"| neurons["neurons"]
style neurons fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
ubiquitin_proteasome["ubiquitin-proteasome"] -->|"active in"| endothelial_cells["endothelial cells"]
style endothelial_cells fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
ubiquitin_proteasome["ubiquitin-proteasome"] -->|"active in"| blood_brain_barrier["blood-brain barrier"]
style blood_brain_barrier fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
ubiquitin_proteasome["ubiquitin-proteasome"] -->|"mediates"| necroptosis["necroptosis"]
style necroptosis fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
ubiquitin_proteasome["ubiquitin-proteasome"] -->|"mediates"| pyroptosis["pyroptosis"]
style pyroptosis fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
NBR1["NBR1"] -->|"participates in"| ubiquitin_proteasome["ubiquitin-proteasome"]
style NBR1 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
OPTN["OPTN"] -->|"participates in"| ubiquitin_proteasome["ubiquitin-proteasome"]
style OPTN fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
CALCOCO2["CALCOCO2"] -->|"participates in"| ubiquitin_proteasome["ubiquitin-proteasome"]
style CALCOCO2 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
SQSTM1["SQSTM1"] -->|"participates in"| ubiquitin_proteasome["ubiquitin-proteasome"]
style SQSTM1 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
RNA["RNA"] -->|"participates in"| ubiquitin_proteasome["ubiquitin-proteasome"]
style RNA fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
style ubiquitin_proteasome fill:#1b5e20,stroke:#4fc3f7,stroke-width:2px,color:#e0e0e0,font-weight:bold| Target | Relation | Type | Str |
|---|---|---|---|
| protein misfolding | mediates | process | 0.80 |
| neural stem cells | active_in | cell_type | 0.80 |
| unfolded protein response | crosstalk_with | pathway | 0.70 |
| neurons | active_in | cell_type | 0.70 |
| endothelial cells | active_in | cell_type | 0.60 |
| blood-brain barrier | active_in | brain_region | 0.60 |
| necroptosis | mediates | process | 0.60 |
| pyroptosis | mediates | process | 0.60 |
| ferroptosis | mediates | process | 0.60 |
| cerebellum | active_in | brain_region | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| NBR1 | participates_in | gene | 0.90 |
| OPTN | participates_in | gene | 0.90 |
| CALCOCO2 | participates_in | gene | 0.90 |
| SQSTM1 | participates_in | gene | 0.90 |
| RNA | participates_in | gene | 0.90 |
| NDP52 | participates_in | gene | 0.90 |
| NLRP3 | participates_in | gene | 0.90 |
| MAP1LC3B | participates_in | gene | 0.90 |
| PRKN | participates_in | gene | 0.90 |
| TNF | participates_in | gene | 0.90 |
| MAPK | participates_in | gene | 0.90 |
| APP | participates_in | gene | 0.90 |
| PS1 | participates_in | gene | 0.90 |
| MYC | participates_in | gene | 0.90 |
| TDP-43 | participates_in | gene | 0.85 |
| DAM microglia | active_in | cell_type | 0.85 |
| G3BP1 | participates_in | gene | 0.80 |
| ULK1 | participates_in | gene | 0.80 |
| ACTB | participates_in | gene | 0.80 |
| GFP | participates_in | gene | 0.80 |
| TAX1BP1 | participates_in | gene | 0.80 |
| FUS | participates_in | gene | 0.80 |
| NLR | participates_in | gene | 0.80 |
| ATG | participates_in | gene | 0.80 |
| ATP | participates_in | gene | 0.80 |
| BCL2 | participates_in | gene | 0.80 |
| LC3B | participates_in | gene | 0.80 |
| SNCA | participates_in | gene | 0.80 |
| RB1 | participates_in | gene | 0.80 |
| RB1CC1 | participates_in | gene | 0.80 |
| GAPDH | participates_in | gene | 0.80 |
| VAMP8 | participates_in | gene | 0.80 |
| SIRT1 | participates_in | gene | 0.80 |
| SNAP29 | participates_in | gene | 0.80 |
| CREB | participates_in | gene | 0.80 |
| STX17 | participates_in | gene | 0.80 |
| GABARAP | participates_in | gene | 0.80 |
| RAS | participates_in | gene | 0.80 |
| USP7 | participates_in | gene | 0.80 |
| UCHL1 | participates_in | gene | 0.80 |
| CASP1 | participates_in | gene | 0.80 |
| ATG5 | participates_in | gene | 0.80 |
| IL1B | participates_in | gene | 0.80 |
| ASC | participates_in | gene | 0.80 |
| PYCARD | participates_in | gene | 0.80 |
| PI3K | participates_in | gene | 0.80 |
| STING | participates_in | gene | 0.80 |
| LRP1 | participates_in | gene | 0.80 |
| glioblastoma | involves | disease | 0.80 |
| RIPK1 | participates_in | gene | 0.80 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||