concept

NUCLEUS

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about NUCLEUS: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

303Connections

4Hypotheses

1Analyses

11Outgoing

50Incoming

0Experiments

1Debates

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💡 Concept Info

Name	NUCLEUS
Key Genes/Proteins	ABCD3, AIM2, ALZHEIMER, AMBRA1, ANXA1, ANXIETY
Related Diseases	acetylcholine, aging, Alzheimer Disease, Alzheimer'S Disease

Wiki Pages (1)

Knowledge base pages for this entity

Canonical Page

Nucleus Vestibularis Superior Expanded (SuVe)

cell · 2984 words

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Pathway Diagram

graph TD
    NUCLEUS["NUCLEUS"]
    NUCLEUS -->|"component_of"| Genome_Packaging["Genome Packaging"]
    NUCLEUS -->|"activates"| PARKINSON_S_DISEASE["PARKINSON'S DISEASE"]
    NUCLEUS -->|"activates"| ROS["ROS"]
    NUCLEUS -->|"activates"| SQSTM1["SQSTM1"]
    NUCLEUS -->|"activates"| STAT3["STAT3"]
    NUCLEUS -->|"regulates"| PREFRONTAL_CORTEX["PREFRONTAL CORTEX"]
    NUCLEUS -->|"regulates"| THALAMUS["THALAMUS"]
    NEURON["NEURON"] -->|"regulates"| NUCLEUS
    HYPOTHALAMUS["HYPOTHALAMUS"] -->|"regulates"| NUCLEUS
    CORTEX["CORTEX"] -->|"expressed in"| NUCLEUS
    Inter_chromosomal_Hubs["Inter-chromosomal Hubs"] -->|"component_of"| NUCLEUS
    CASP2["CASP2"] -->|"expressed in"| NUCLEUS
    ENDOPLASMIC_RETICULUM["ENDOPLASMIC RETICULUM"] -->|"activates"| NUCLEUS

Outgoing (11)

Target	Relation	Type	Str
Genome Packaging	component_of	process	0.85
HEPATOCYTES	associated_with	concept	0.50
HEPATOCYTES	interacts_with	concept	0.50
CEREBRAL CORTEX	associated_with	concept	0.50
TEMPORAL LOBE	associated_with	concept	0.50
SRPK1	inhibits	concept	0.50
SRPK1	activates	concept	0.50
INTERNEURONS	interacts_with	concept	0.50
AMYGDALA	associated_with	concept	0.50
INTERNEURONS	associated_with	concept	0.50
ENDOPLASMIC RETICULUM	activates	concept	0.50

Incoming (292)

Source	Relation	Type	Str
cell-types-nucleus-basalis-meynert	describes	wiki	1.00
3D genome organization	involved_in	process	0.95
CHMP2BIn5	associated_with	protein	0.95
NPM1	transports	protein	0.90
Inter-chromosomal Hubs	component_of	process	0.90
APOE	translocates_to	gene	0.80
CASP2	expressed_in	protein	0.72
DNAJB6a	regulates	protein	0.70
ANXA1	interacts_with	protein	0.70
Dendritic Cell	activates	cell_type	0.50
DNA DAMAGE	activates	concept	0.50
TREM2	associated_with	gene	0.50
TREM2	interacts_with	gene	0.50
MAP1LC3A	activates	gene	0.50
MAPK14	activates	gene	0.50
BCL2L13	activates	gene	0.50
PEX3	activates	gene	0.50
RTN3	activates	gene	0.50
NBR1	activates	gene	0.50
UBIQUITIN	activates	protein	0.50
PARL	activates	protein	0.50
LC3B	activates	protein	0.50
DNM1L	activates	gene	0.50
PARKIN	activates	gene	0.50
NDP52	activates	gene	0.50
FIP200	activates	gene	0.50
FAM134B	activates	gene	0.50
Alzheimer Disease	activates	disease	0.50
EIF2S1	activates	concept	0.50
RIP3	activates	concept	0.50
BNIP3	activates	gene	0.50
PGC-1Α	activates	protein	0.50
PPAR	activates	protein	0.50
GLUT4	activates	concept	0.50
GENE EXPRESSION	activates	concept	0.50
B-RAF	expressed_in	protein	0.50
Rna Splicing	associated_with	gene	0.50
GENE EXPRESSION	expressed_in	concept	0.50
BRAINSTEM	associated_with	concept	0.50
INSULIN	interacts_with	concept	0.50
NEURONS	regulates	concept	0.50
NEUTROPHIL	regulates	cell_type	0.50
NEURONS	activates	concept	0.50
CLOCK	activates	gene	0.50
Protein Aggregation	activates	process	0.50
PARKINSON'S	activates	concept	0.50
α-SYNUCLEIN	activates	concept	0.50
TUMOR	inhibits	disease	0.50
Cortex	associated_with	brain_region	0.50
Proteins	associated_with	protein	0.50

Targeting Hypotheses (4)

Hypotheses where this entity is a therapeutic target

Hypothesis	Score	Disease	Analysis
Thalamic Reticular Nucleus (TRN) GluN2B Hyperexcitability Di	0.633	neuroscience	GluN2B-Mediated Thalamocortical Control
MT1 Receptor Activation at Low Doses Synchronizes Suprachias	0.405	-	What is the minimum effective dose of tr
Thalamic anterior nucleus hyperconnectivity drives early-sta	0.380	alzheimers	Human connectome alterations and network
Adaptive Deep Brain Stimulation Targeting the Pedunculoponti	0.000	-	GBA-Synuclein Loop: Therapeutic Strategi

Mentioning Analyses (1)

Scientific analyses that reference this entity

Does DNAJB6 directly inhibit cross-seeding between tau, α-synuclein, and TDP-43

neurodegeneration | 2026-04-12 | 0 hypotheses

Experiments (0)

Experimental studies targeting or related to this entity

Experiment	Type	Disease	Score	Feasibility	Model	Status	Est. Cost
No experiments found

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMID	Authors	Journal	Year	Citations
No papers found

Debates (1)

Multi-agent debates referencing this entity

The debate revealed that DNAJB6 evidence is limited to polyglutamine aggregation

closed · Rounds: 4 · Score: 0.79 · 2026-04-16

Related Research

Hypotheses and analyses mentioning NUCLEUS in their description or question text

No additional research found