Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about apoptosis pathway: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
No summary available yet. View on Wiki →
| Name | apoptosis pathway |
| Key Genes/Proteins | TNF, ERK, JNK, ROS, NLRP3, ATP |
| Related Pathways | pyroptosis, ferroptosis, necroptosis |
Knowledge base pages for this entity
graph TD
apoptosis_pathway["apoptosis pathway"] -->|"crosstalk with"| pyroptosis["pyroptosis"]
style pyroptosis fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
apoptosis_pathway["apoptosis pathway"] -->|"crosstalk with"| ferroptosis["ferroptosis"]
style ferroptosis fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
apoptosis_pathway["apoptosis pathway"] -->|"crosstalk with"| necroptosis["necroptosis"]
style necroptosis fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
apoptosis_pathway["apoptosis pathway"] -->|"crosstalk with"| unfolded_protein_response["unfolded protein response"]
style unfolded_protein_response fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
apoptosis_pathway["apoptosis pathway"] -->|"mediates"| protein_misfolding["protein misfolding"]
style protein_misfolding fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
apoptosis_pathway["apoptosis pathway"] -->|"active in"| T_cells["T cells"]
style T_cells fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
apoptosis_pathway["apoptosis pathway"] -->|"active in"| spinal_cord["spinal cord"]
style spinal_cord fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
TNF["TNF"] -->|"participates in"| apoptosis_pathway["apoptosis pathway"]
style TNF fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
ERK["ERK"] -->|"participates in"| apoptosis_pathway["apoptosis pathway"]
style ERK fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
JNK["JNK"] -->|"participates in"| apoptosis_pathway["apoptosis pathway"]
style JNK fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
ROS["ROS"] -->|"participates in"| apoptosis_pathway["apoptosis pathway"]
style ROS fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
NLRP3["NLRP3"] -->|"participates in"| apoptosis_pathway["apoptosis pathway"]
style NLRP3 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
style apoptosis_pathway fill:#1b5e20,stroke:#4fc3f7,stroke-width:2px,color:#e0e0e0,font-weight:bold| Target | Relation | Type | Str |
|---|---|---|---|
| pyroptosis | crosstalk_with | pathway | 0.90 |
| ferroptosis | crosstalk_with | pathway | 0.90 |
| necroptosis | crosstalk_with | pathway | 0.90 |
| ferroptosis | mediates | process | 0.90 |
| necroptosis | mediates | process | 0.90 |
| pyroptosis | mediates | process | 0.90 |
| neural stem cells | active_in | cell_type | 0.80 |
| unfolded protein response | crosstalk_with | pathway | 0.70 |
| protein misfolding | mediates | process | 0.70 |
| T cells | active_in | cell_type | 0.60 |
| spinal cord | active_in | brain_region | 0.60 |
| endothelial cells | active_in | cell_type | 0.60 |
| oligodendrocytes | active_in | cell_type | 0.60 |
| white matter | active_in | brain_region | 0.60 |
| neurons | active_in | cell_type | 0.60 |
| ER stress | mediates | process | 0.60 |
| tau phosphorylation | mediates | process | 0.60 |
| p53 pathway | crosstalk_with | pathway | 0.60 |
| blood-brain barrier | active_in | brain_region | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| TNF | participates_in | gene | 0.90 |
| ERK | participates_in | gene | 0.90 |
| JNK | participates_in | gene | 0.90 |
| ROS | participates_in | gene | 0.90 |
| NLRP3 | participates_in | gene | 0.90 |
| ATP | participates_in | gene | 0.90 |
| DNA | participates_in | gene | 0.90 |
| SQSTM1 | participates_in | gene | 0.90 |
| AMPK | participates_in | gene | 0.90 |
| BECN1 | participates_in | gene | 0.90 |
| RNA | participates_in | gene | 0.90 |
| STAT3 | participates_in | gene | 0.90 |
| ASC | participates_in | gene | 0.90 |
| neurodegeneration | involves | disease | 0.80 |
| PARP1 | participates_in | gene | 0.80 |
| IL1B | participates_in | gene | 0.80 |
| ATG | participates_in | gene | 0.80 |
| MAP1LC3B | participates_in | gene | 0.80 |
| AMBRA1 | participates_in | gene | 0.80 |
| HIF | participates_in | gene | 0.80 |
| CALCOCO2 | participates_in | gene | 0.80 |
| BCL2 | participates_in | gene | 0.80 |
| LC3B | participates_in | gene | 0.80 |
| ALS | participates_in | gene | 0.80 |
| AKT1 | participates_in | gene | 0.80 |
| CASP3 | participates_in | gene | 0.80 |
| GAPDH | participates_in | gene | 0.80 |
| AND | participates_in | gene | 0.80 |
| SIRT1 | participates_in | gene | 0.80 |
| BCL2L1 | participates_in | gene | 0.80 |
| traumatic brain injury | involves | disease | 0.80 |
| GFP | participates_in | gene | 0.80 |
| autism spectrum disorder | involves | disease | 0.80 |
| TREM2 | participates_in | gene | 0.80 |
| TNFR1 | participates_in | gene | 0.80 |
| JAK2 | participates_in | gene | 0.80 |
| BAX | participates_in | gene | 0.80 |
| SLC16A1 | participates_in | gene | 0.80 |
| BDNF | participates_in | gene | 0.80 |
| SRPK1 | participates_in | gene | 0.80 |
| STS | participates_in | gene | 0.80 |
| Alzheimer's disease | involves | disease | 0.70 |
| IL6 | participates_in | gene | 0.70 |
| NBR1 | participates_in | gene | 0.70 |
| PINK1 | participates_in | gene | 0.70 |
| FIP200 | participates_in | gene | 0.70 |
| OPTN | participates_in | gene | 0.70 |
| PHB2 | participates_in | gene | 0.70 |
| NIX | participates_in | gene | 0.70 |
| CAT | participates_in | gene | 0.70 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||