protein

RAB5

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about RAB5: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

395Connections
0Hypotheses
3Analyses
50Outgoing
50Incoming

Summary

RAB5 is a protein involved in neurodegeneration research. Key relationships include: associated with, therapeutic target, expressed in. Associated with Aging, Als, Alzheimer. Connected to 278 entities in the SciDEX knowledge graph.

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🔬 Protein Info
Gene SymbolRAB5A
Full NameRAB5A, member RAS oncogene family
AliasesRas-Related Protein Rab-5A
Chromosome3p24.3
Functionis an important component in the neurobiology of neurodegenerative diseases.
Molecular Weight~24 kDa
Amino Acids218 aa
PathwaysMAPK signaling
UniProt IDP20339
NCBI Gene ID5868
Ensembl IDENSG00000112984
OMIM171585
GeneCardsRAB5A
Human Protein AtlasRAB5A
Protein Length218 amino acids
Associated DiseasesALS
InteractionsNEURODEGENERATIVE DISEASES
KG Connections32 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: RAB5 — AlphaFold P20339 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

RAB5A Gene

gene · 1504 words

Vesicle Trafficking Dysfunction in Corticobasal Syndrome

mechanism · 4859 words

LRRK2 G2019S

disease · 3622 words

Retromer Dysfunction in Corticobasal Syndrome

mechanism · 3576 words

DNAJC13 — DnaJ Heat Shock Protein Family Member C13

gene · 3528 words

Amyloid-beta Cellular Uptake Pathway

mechanism · 3408 words

Pathway Diagram

flowchart TD
    RAB5["RAB5<br/>Rab5 GTPase"]
    
    vesicle_trafficking["Vesicle<br/>Trafficking"]
    endocytosis["Endocytic<br/>Pathway"]
    autophagy["Autophagy<br/>Regulation"]
    ATG9A["ATG9A<br/>Autophagy Gene"]
    
    neuroprotection["Neuroprotective<br/>Mechanisms"]
    cellular_homeostasis["Cellular<br/>Homeostasis"]
    
    neurodegeneration["Neurodegeneration<br/>Process"]
    ALS["Amyotrophic Lateral<br/>Sclerosis (ALS)"]
    dementia["Dementia<br/>Disorders"]
    FTD["Frontotemporal<br/>Dementia (FTD)"]
    MS["Multiple<br/>Sclerosis (MS)"]
    aging["Aging-Related<br/>Decline"]
    
    protein_aggregation["Protein<br/>Aggregation"]
    synaptic_dysfunction["Synaptic<br/>Dysfunction"]
    
    RAB5 --|"activates"|--> vesicle_trafficking
    RAB5 --|"regulates"|--> endocytosis
    RAB5 --|"controls"|--> autophagy
    RAB5 --|"regulates"|--> ATG9A
    
    vesicle_trafficking --|"maintains"|--> cellular_homeostasis
    endocytosis --|"supports"|--> neuroprotection
    autophagy --|"clears"|--> protein_aggregation
    
    RAB5 --|"protects_against"|--> neurodegeneration
    neuroprotection --|"prevents"|--> synaptic_dysfunction
    
    neurodegeneration --|"manifests_as"|--> ALS
    neurodegeneration --|"manifests_as"|--> dementia
    neurodegeneration --|"manifests_as"|--> FTD
    neurodegeneration --|"manifests_as"|--> MS
    
    aging --|"accelerates"|--> neurodegeneration
    protein_aggregation --|"promotes"|--> synaptic_dysfunction
    synaptic_dysfunction --|"leads_to"|--> neurodegeneration
    
    style RAB5 fill:#006494
    style vesicle_trafficking fill:#1b5e20
    style endocytosis fill:#1b5e20
    style autophagy fill:#1b5e20
    style neuroprotection fill:#1b5e20
    style cellular_homeostasis fill:#1b5e20
    style ATG9A fill:#4a1a6b
    style neurodegeneration fill:#ef5350
    style ALS fill:#5d4400
    style dementia fill:#5d4400
    style FTD fill:#5d4400
    style MS fill:#5d4400
    style aging fill:#5d4400
    style protein_aggregation fill:#ef5350
    style synaptic_dysfunction fill:#ef5350

Outgoing (233)

TargetRelationTypeStr
vesicle traffickingactivatespathway0.80
neurodegenerationprotects_againstdisease0.80
NEURODEGENERATIONprotects_againstgene0.80
Neurodegenerationprotects_againstprocess0.80
Neurodegenerationassociated_withdisease0.75

Incoming (162)

SourceRelationTypeStr
NEURODEGENERATIONassociated_withgene0.70
ELAVL2therapeutic_targetgene0.60
C1Qinhibitsgene0.60
MTORtherapeutic_targetgene0.60
CLPPtherapeutic_targetgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (3)

Scientific analyses that reference this entity

Circuit-level neural dynamics in neurodegeneration

neuroscience | 2026-04-03 | 49 hypotheses Top: 0.709

Senolytic therapy for age-related neurodegeneration

neurodegeneration | 2026-04-01 | 8 hypotheses Top: 0.703

4R-tau strain-specific spreading patterns in PSP vs CBD

neurodegeneration | 2026-04-01 | 7 hypotheses Top: 0.507

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found