Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about TRIM21: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
TRIM21 is a concept in neurodegeneration research. Key relationships include: activates, interacts with, regulates. Associated with AD, ALI, AMI. Connected to 176 entities in the SciDEX knowledge graph.
| Name | TRIM21 |
| Key Genes/Proteins | G3BP1, TAB1, Nuclear Pore Proteins, IgG, SQSTM1, ubiquitin |
| Related Diseases | Cancer |
Knowledge base pages for this entity
graph TD
TRIM21["TRIM21"]
TRIM21 -->|"interacts"| Carcinoma["Carcinoma"]
TRIM21 -->|"ubiquitinates"| SQSTM1["SQSTM1"]
TRIM21 -->|"interacts"| Amyotrophic_Lateral_Sclerosis["Amyotrophic Lateral Sclerosis"]
TRIM21 -->|"interacts"| Dementia["Dementia"]
TRIM21 -->|"interacts"| OPTN["OPTN"]
TRIM21 -->|"activates"| NEURODEGENERATIVE_DISEASES["NEURODEGENERATIVE DISEASES"]
TRIM21 -->|"interacts"| ACTB["ACTB"]
TRIM21 -->|"interacts"| ALS["ALS"]
TRIM21 -->|"interacts"| CALCOCO2["CALCOCO2"]
TRIM21 -->|"interacts"| NBR1["NBR1"]
SQSTM1 -->|"binds"| TRIM21
C9ORF72["C9ORF72"] -->|"interacts"| TRIM21
LC3["LC3"] -->|"interacts"| TRIM21
P62["P62"] -->|"interacts"| TRIM21
FUS["FUS"] -->|"interacts"| TRIM21
UBIQUITIN["UBIQUITIN"] -->|"regulates"| TRIM21
SMCR8["SMCR8"] -->|"interacts"| TRIM21
NDP52["NDP52"] -->|"interacts"| TRIM21
CALCOCO2 -->|"interacts"| TRIM21| Target | Relation | Type | Str |
|---|---|---|---|
| Cancer | activates | disease | 1.00 |
| G3BP1 | phosphorylates | protein | 0.95 |
| Stress Granule Homeostasis | regulates | process | 0.95 |
| STRESS GRANULE HOMEOSTASIS | regulates | entity | 0.95 |
| TAB1 | interacts_with | protein | 0.95 |
| Stress Granule Homeostasis | modulates | process | 0.95 |
| stress granules | regulates | process | 0.95 |
| stress granule homeostasis | regulates | process | 0.92 |
| Nuclear Pore Proteins | degrades | protein | 0.92 |
| SG FORMATION | inhibits | entity | 0.90 |
| SG FORMATION | regulates | entity | 0.90 |
| IgG | binds | protein | 0.90 |
| SQSTM1 | inhibits | protein | 0.90 |
| ubiquitin | interacts_with | protein | 0.90 |
| SG formation | modulates | process | 0.90 |
| SG elimination | modulates | process | 0.90 |
| stress granules | expressed_in | cellular_structure | 0.90 |
| G3BP1 | ubiquitinates | protein | 0.90 |
| NUP98 | degrades | protein | 0.90 |
| Multimeric Proteins | degrades | protein | 0.90 |
| G3BP1 | catalyzes_ubiquitination | protein | 0.90 |
| CANCER | activates | gene | 0.90 |
| ubiquitin ligase pathway | participates_in | pathway | 0.88 |
| Substrate-Induced Clustering | associated_with | process | 0.88 |
| Stress Granule Formation | inhibits | phenotype | 0.85 |
| Tumor | activates | disease | 0.85 |
| oxidative stress | promotes | process | 0.85 |
| Nucleocytoplasmic Trafficking | regulates | process | 0.85 |
| Biomolecular Condensates | targets | process | 0.85 |
| Carcinoma | interacts_with | disease | 0.80 |
| G3BP1 | associated_with | protein | 0.80 |
| Stress Granules | regulates | biological_process | 0.80 |
| Oxidative Stress | associated_with | process | 0.80 |
| Stress Granules | inhibits_formation | cellular_structure | 0.80 |
| Oxidative Stress | activates | pathway | 0.80 |
| AKT | activates | gene | 0.80 |
| Als | activates | disease | 0.75 |
| Hepatocellular Carcinoma | activates | disease | 0.75 |
| Carcinoma | activates | disease | 0.75 |
| Neurodegenerative Diseases | therapeutic_target | disease | 0.75 |
| SQSTM1 | ubiquitinates | gene | 0.70 |
| CALCOCO2 | interacts_with | gene | 0.70 |
| UBIQUITIN | regulates | gene | 0.70 |
| ubiquitin-proteasome | participates_in | pathway | 0.70 |
| Amyotrophic Lateral Sclerosis | interacts_with | disease | 0.65 |
| Dementia | interacts_with | disease | 0.65 |
| Als | regulates | disease | 0.65 |
| Lupus | contributes_to | disease | 0.65 |
| Cancer | therapeutic_target | disease | 0.65 |
| Stroke | regulates | disease | 0.65 |
| Source | Relation | Type | Str |
|---|---|---|---|
| Acepromazine | activates | drug | 0.95 |
| (S)-Ace-Oh | activates | compound | 0.90 |
| OXIDATIVE STRESS | activates | gene | 0.80 |
| SQSTM1 | binds | gene | 0.70 |
| NDP52 | interacts_with | gene | 0.70 |
| KEAP1 | activates | gene | 0.70 |
| P62 | activates | gene | 0.70 |
| PI3K | activates | gene | 0.70 |
| C9ORF72 | interacts_with | gene | 0.60 |
| LC3 | interacts_with | gene | 0.60 |
| P62 | interacts_with | gene | 0.60 |
| FUS | interacts_with | gene | 0.60 |
| UBIQUITIN | regulates | gene | 0.60 |
| SQSTM1 | interacts_with | gene | 0.60 |
| SMCR8 | interacts_with | gene | 0.60 |
| CALCOCO2 | interacts_with | gene | 0.60 |
| ULK1 | interacts_with | gene | 0.60 |
| OPTINEURIN | interacts_with | gene | 0.60 |
| AUTOPHAGY | regulates | gene | 0.60 |
| G3BP1 | interacts_with | gene | 0.60 |
| ALS | interacts_with | gene | 0.60 |
| MAP1LC3 | interacts_with | gene | 0.60 |
| ACTB | interacts_with | gene | 0.60 |
| DEMENTIA | interacts_with | gene | 0.60 |
| OPTN | interacts_with | gene | 0.60 |
| TOLLIP | interacts_with | gene | 0.60 |
| TAX1BP1 | interacts_with | gene | 0.60 |
| AMYOTROPHIC LATERAL SCLEROSIS | interacts_with | gene | 0.60 |
| GFP | interacts_with | gene | 0.60 |
| BECN1 | interacts_with | gene | 0.60 |
| NEURODEGENERATIVE DISEASES | activates | gene | 0.60 |
| HUNTINGTIN | regulates | gene | 0.60 |
| FUT8 | activates | gene | 0.60 |
| PI3K | regulates | gene | 0.60 |
| UBIQUITIN | activates | gene | 0.60 |
| APOPTOSIS | therapeutic_target | gene | 0.60 |
| STAT3 | activates | gene | 0.60 |
| NF-ΚB | activates | gene | 0.60 |
| P53 | activates | gene | 0.60 |
| SQSTM1 | activates | gene | 0.60 |
| STROKE | regulates | gene | 0.60 |
| AUTOPHAGY | inhibits | gene | 0.60 |
| RNF13 | inhibits | gene | 0.60 |
| APOPTOSIS | inhibits | gene | 0.60 |
| FERROPTOSIS | activates | gene | 0.60 |
| APOPTOSIS | activates | gene | 0.60 |
| BECN1 | activates | gene | 0.60 |
| TP53 | activates | gene | 0.60 |
| INSULIN RESISTANCE | activates | gene | 0.60 |
| VHL | inhibits | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
neurodegeneration | 2026-04-08 | 0 hypotheses
neurodegeneration | 2026-04-07 | 0 hypotheses
neurodegeneration | 2026-04-06 | 0 hypotheses
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||