Entity Detail β Knowledge Graph Node
This page aggregates everything SciDEX knows about MS4A6A: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
Membrane Spanning 4-Domains A6A, Alzheimer's disease risk gene involved in microglial signaling
| Gene Symbol | MS4A6A |
| Full Name | Membrane Spanning 4-Domains A6A |
| Chromosome | 11q12.2 |
| Function | Membrane Protein Function: MS4A6A operates as a membrane receptor or scavenger receptor involved in cellular homeostasis |
| Primary Expression | Microglia, B-cells, Myeloid cells |
| Molecular Weight | 28 kDa |
| Amino Acids | 243 aa |
| Exons | 6 |
| UniProt ID | Q9H5Z1 |
| NCBI Gene ID | 64231 |
| Ensembl ID | ENSG00000110079 |
| GeneCards | MS4A6A |
| Human Protein Atlas | MS4A6A |
| Associated Diseases | ALS, Alzheimer, GLIOBLASTOMA |
| Interactions | ABCA7, PICALM, MS4A4E, CLU, APOE, BIN1 |
| KG Connections | 211 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
graph TD
MS4A6A["<b>MS4A6A</b>"]
OPTN["OPTN"]
MS4A6A -->|"associated with"| OPTN
PARK7["PARK7"]
MS4A6A -->|"associated with"| PARK7
PARKINSON["PARKINSON"]
MS4A6A -->|"associated with"| PARKINSON
PINK1["PINK1"]
MS4A6A -->|"associated with"| PINK1
PSEN1["PSEN1"]
MS4A6A -->|"associated with"| PSEN1
PSEN2["PSEN2"]
MS4A6A -->|"associated with"| PSEN2
SNCA["SNCA"]
MS4A6A -->|"associated with"| SNCA
SOD1["SOD1"]
MS4A6A -->|"associated with"| SOD1
TAU["TAU"]
MS4A6A -->|"associated with"| TAU
TBK1["TBK1"]
MS4A6A -->|"associated with"| TBK1
TREM2["TREM2"]
MS4A6A -->|"associated with"| TREM2
VPS35["VPS35"]
MS4A6A -->|"associated with"| VPS35
ABCA7["ABCA7"]
ABCA7 -->|"associated with"| MS4A6A
ALPHA_SYNUCLEIN["ALPHA-SYNUCLEIN"]
ALPHA_SYNUCLEIN -->|"associated with"| MS4A6A
ALS["ALS"]
ALS -->|"associated with"| MS4A6A
ALZHEIMER["ALZHEIMER"]
ALZHEIMER -->|"associated with"| MS4A6A
AMYLOID["AMYLOID"]
AMYLOID -->|"associated with"| MS4A6A
APOE["APOE"]
APOE -->|"associated with"| MS4A6A
APP["APP"]
APP -->|"associated with"| MS4A6A
ATP13A2["ATP13A2"]
ATP13A2 -->|"associated with"| MS4A6A
AUTOPHAGY["AUTOPHAGY"]
AUTOPHAGY -->|"associated with"| MS4A6A
BIN1["BIN1"]
BIN1 -->|"associated with"| MS4A6A
C9ORF72["C9ORF72"]
C9ORF72 -->|"associated with"| MS4A6A
CD33["CD33"]
CD33 -->|"associated with"| MS4A6A
style MS4A6A fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| ds-f50762b67605 | provides_data_for | dataset | 1.00 |
| ds-83b31ef18d49 | provides_data_for | dataset | 1.00 |
| DAP12 | binds | protein | 0.90 |
| glioblastoma | activates | disease | 0.80 |
| Alzheimer's disease | interacts_with | disease | 0.70 |
| glioblastoma | regulates | disease | 0.70 |
| TREM2 | co_discussed | gene | 0.65 |
| neuroinflammation | co_discussed | concept | 0.65 |
| amyloid | co_discussed | concept | 0.65 |
| tau | co_discussed | concept | 0.65 |
| astrocyte | co_discussed | concept | 0.65 |
| MTOR | co_discussed | gene | 0.65 |
| TREM2 | causes | gene | 0.65 |
| Ms | expressed_in | disease | 0.65 |
| Glioblastoma | activates | disease | 0.65 |
| Alzheimer | associated_with | disease | 0.65 |
| Als | associated_with | disease | 0.65 |
| ALS | associated_with | disease | 0.65 |
| MICROGLIA | protects_against | cell_type | 0.65 |
| GLIOBLASTOMA | causes | disease | 0.65 |
| T CELLS | activates | cell_type | 0.65 |
| MICROGLIA | regulates | cell_type | 0.65 |
| AGING | interacts_with | phenotype | 0.65 |
| CASS4 | associated_with | gene | 0.60 |
| CLU | associated_with | gene | 0.60 |
| CHRNE | associated_with | gene | 0.60 |
| APOE | associated_with | gene | 0.60 |
| CD33 | associated_with | gene | 0.60 |
| BIN1 | associated_with | gene | 0.60 |
| SPI1 | associated_with | gene | 0.60 |
| ABCA7 | interacts_with | gene | 0.60 |
| PICALM | interacts_with | gene | 0.60 |
| MS4A4E | interacts_with | gene | 0.60 |
| CLU | interacts_with | gene | 0.60 |
| APOE | interacts_with | gene | 0.60 |
| BIN1 | interacts_with | gene | 0.60 |
| CD2AP | interacts_with | gene | 0.60 |
| TOMM40 | interacts_with | gene | 0.60 |
| NME8 | interacts_with | gene | 0.60 |
| PTK2B | interacts_with | gene | 0.60 |
| CR1 | associated_with | gene | 0.60 |
| ZCWPW1 | interacts_with | gene | 0.60 |
| CR1 | interacts_with | gene | 0.60 |
| SPI1 | regulates | gene | 0.60 |
| MS4A6E | interacts_with | gene | 0.60 |
| TREM2 | regulates | gene | 0.60 |
| TREM2 | interacts_with | gene | 0.60 |
| TREM2 | activates | gene | 0.60 |
| SYK | implicated_in | gene | 0.60 |
| SYK | associated_with | gene | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| ds-f50762b67605 | data_in | dataset | 1.00 |
| ds-83b31ef18d49 | data_in | dataset | 1.00 |
| MS4A4A | interacts_with | gene | 0.90 |
| GBM | activates | gene | 0.80 |
| GBM | regulates | gene | 0.70 |
| BDNF | co_discussed | gene | 0.65 |
| GBM | associated_with | gene | 0.60 |
| CR1 | associated_with | gene | 0.60 |
| ZCWPW1 | interacts_with | gene | 0.60 |
| GAB2 | interacts_with | gene | 0.60 |
| CR1 | interacts_with | gene | 0.60 |
| PTK2B | interacts_with | gene | 0.60 |
| CD2AP | interacts_with | gene | 0.60 |
| APOE | interacts_with | gene | 0.60 |
| BIN1 | interacts_with | gene | 0.60 |
| NME8 | interacts_with | gene | 0.60 |
| ABCA7 | interacts_with | gene | 0.60 |
| MS4A4E | interacts_with | gene | 0.60 |
| CLU | interacts_with | gene | 0.60 |
| TOMM40 | interacts_with | gene | 0.60 |
| SPI1 | associated_with | gene | 0.60 |
| CHRNE | associated_with | gene | 0.60 |
| CASS4 | associated_with | gene | 0.60 |
| BIN1 | regulates | gene | 0.60 |
| CD33 | regulates | gene | 0.60 |
| BIN1 | co_discussed | gene | 0.60 |
| CD33 | co_discussed | gene | 0.60 |
| ABCA7 | co_discussed | gene | 0.60 |
| APOE | co_discussed | gene | 0.60 |
| CLU | co_discussed | gene | 0.60 |
| CR1 | co_discussed | gene | 0.60 |
| FCER1G | regulates | gene | 0.60 |
| ABCA7 | regulates | gene | 0.60 |
| MS4A4A | regulates | gene | 0.60 |
| DAP12 | activates | gene | 0.60 |
| MERTK | implicated_in | gene | 0.60 |
| MERTK | associated_with | gene | 0.60 |
| CD33 | activates | gene | 0.60 |
| CR1 | activates | gene | 0.60 |
| APOE | implicated_in | gene | 0.60 |
| GNA12 | associated_with | gene | 0.60 |
| ABI3 | expressed_in | gene | 0.60 |
| CTSB | expressed_in | gene | 0.60 |
| BIN1 | implicated_in | gene | 0.60 |
| EED | causes | gene | 0.60 |
| EED | activates | gene | 0.60 |
| MS4A4A | expressed_in | gene | 0.60 |
| APOC1 | associated_with | gene | 0.60 |
| BDNF | associated_with | gene | 0.60 |
| CD2AP | associated_with | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||