Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about COPD: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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| Associated Genes | MMP9, FEATURE DEGS, PYCARD, 6 GENES, PARKIN, SQSTM1, NLRP3, PINK1 |
| Therapeutic Agents | BYF, Anti-Inflammatory Therapy |
| KG Connections | 309 knowledge graph edges |
| Databases | OMIMOrphanetClinicalTrialsPubMed |
Knowledge base pages for this entity
graph TD
COPD["COPD"] -->|"associated"| Persistent_Cough["Persistent Cough"]
style Persistent_Cough fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
COPD["COPD"] -->|"associated"| Sputum_Production["Sputum Production"]
style Sputum_Production fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
COPD["COPD"] -->|"associated"| Sarcopenia["Sarcopenia"]
style Sarcopenia fill:#1a2a3a,stroke:#ef5350,stroke-width:1px,color:#fff
COPD["COPD"] -->|"interacts"| INFLAMMATION["INFLAMMATION"]
style INFLAMMATION fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
COPD["COPD"] -->|"activates"| FRONTOTEMPORAL_DEMENTIA["FRONTOTEMPORAL DEMENTIA"]
style FRONTOTEMPORAL_DEMENTIA fill:#1a2a3a,stroke:#ef5350,stroke-width:1px,color:#fff
COPD["COPD"] -->|"activates"| ROS["ROS"]
style ROS fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
COPD["COPD"] -->|"activates"| ENDOPLASMIC_RETICULUM["ENDOPLASMIC RETICULUM"]
style ENDOPLASMIC_RETICULUM fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
Chronic_Inflammation["Chronic Inflammation"] -->|"associated"| COPD["COPD"]
style Chronic_Inflammation fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
Neutrophilic_Inflammation["Neutrophilic Inflammation"] -->|"contributes to"| COPD["COPD"]
style Neutrophilic_Inflammation fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
STAT3["STAT3"] -->|"therapeutic target"| COPD["COPD"]
style STAT3 fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
HUB_GENES["HUB GENES"] -->|"risk factor for"| COPD["COPD"]
style HUB_GENES fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
Cytokines["Cytokines"] -->|"contributes to"| COPD["COPD"]
style Cytokines fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
style COPD fill:#ef5350,stroke:#4fc3f7,stroke-width:2px,color:#e0e0e0,font-weight:bold| Target | Relation | Type | Str |
|---|---|---|---|
| Airflow Limitation | causes | phenotype | 0.95 |
| Persistent Cough | associated_with | phenotype | 0.90 |
| Sputum Production | associated_with | phenotype | 0.90 |
| Persistent Cough | causes | phenotype | 0.90 |
| Sputum Production | causes | phenotype | 0.90 |
| Sarcopenia | associated_with | disease | 0.70 |
| PYROPTOSIS | implicated_in | phenotype | 0.55 |
| INFLAMMATION | interacts_with | process | 0.50 |
| SYNUCLEIN | activates | concept | 0.50 |
| Reactive Oxygen Species | activates | process | 0.50 |
| CHRONIC INFLAMMATION | interacts_with | concept | 0.50 |
| Proteins | activates | protein | 0.50 |
| TSLP | inhibits | concept | 0.50 |
| TSLP | associated_with | concept | 0.50 |
| NEUTROPHIL | associated_with | cell_type | 0.50 |
| NEUTROPHIL | regulates | cell_type | 0.50 |
| NEUTROPHIL | activates | cell_type | 0.50 |
| GBA | associated_with | gene | 0.45 |
| JNK | associated_with | gene | 0.45 |
| RB1 | associated_with | gene | 0.45 |
| ATM | associated_with | gene | 0.45 |
| CTSD | co_discussed | gene | 0.40 |
| HEPSIN | co_discussed | protein | 0.40 |
| DDIT3 | co_discussed | gene | 0.40 |
| CHOP | co_discussed | gene | 0.40 |
| DNA | co_discussed | protein | 0.40 |
| DISC1 | co_discussed | gene | 0.40 |
| DNM1L | co_discussed | gene | 0.40 |
| DRP1 | co_discussed | protein | 0.40 |
| EIF2AK3 | co_discussed | gene | 0.40 |
| PERK | co_discussed | protein | 0.40 |
| EIF2S1 | co_discussed | gene | 0.40 |
| EIF2Α | co_discussed | protein | 0.40 |
| EMD | co_discussed | gene | 0.40 |
| EPAS1 | co_discussed | gene | 0.40 |
| ERN1 | co_discussed | gene | 0.40 |
| IRE1 | co_discussed | protein | 0.40 |
| GNAL | co_discussed | gene | 0.40 |
| FTD | co_discussed | disease | 0.40 |
| FRONTOTEMPORAL DEMENTIA | co_discussed | disease | 0.40 |
| FUNDC1 | co_discussed | gene | 0.40 |
| G3BP1 | co_discussed | gene | 0.40 |
| GBA | co_discussed | gene | 0.40 |
| HIF1A | co_discussed | protein | 0.40 |
| LGALS3 | co_discussed | gene | 0.40 |
| LC3 | co_discussed | protein | 0.40 |
| LMNA | co_discussed | gene | 0.40 |
| MAPK8 | co_discussed | gene | 0.40 |
| JNK | co_discussed | protein | 0.40 |
| MAP1LC3B | co_discussed | gene | 0.40 |
| Source | Relation | Type | Str |
|---|---|---|---|
| Chronic Inflammation | associated_with | process | 0.95 |
| Neutrophilic Inflammation | contributes_to | process | 0.95 |
| STAT3 | therapeutic_target | protein | 0.90 |
| Inflammation | involved_in | process | 0.90 |
| Hub Genes (9 Novel) | biomarker_for | biomarker | 0.90 |
| HUB GENES | risk_factor_for | gene | 0.85 |
| Hub Genes (2 Genes) | risk_factor_for | biomarker | 0.85 |
| Cytokines | contributes_to | biological_process | 0.80 |
| FEATURE DEGS | causes | gene | 0.80 |
| CHIP | associated_with | disease | 0.75 |
| Anti-Inflammatory Therapy | treats | drug | 0.75 |
| 6 GENES | causes | gene | 0.75 |
| BYF | treats | drug | 0.72 |
| Protease-Antiprotease Imbalance | contributes_to | biological_process | 0.70 |
| Epigenetic Factors | contributes_to | biological_process | 0.70 |
| MMP9 | associated_with | protein | 0.64 |
| PYCARD | biomarker_for | gene | 0.60 |
| NEUTROPHILS | expressed_in | cell_type | 0.55 |
| AMPK | activates | gene | 0.50 |
| AMBRA1 | activates | protein | 0.50 |
| PERK | activates | gene | 0.50 |
| HIF1A | activates | gene | 0.50 |
| ABCD3 | activates | gene | 0.50 |
| Autophagy | activates | process | 0.50 |
| MITOCHONDRIA | activates | cell_type | 0.50 |
| SNCA | activates | gene | 0.50 |
| STING1 | activates | protein | 0.50 |
| G3BP1 | activates | gene | 0.50 |
| EIF2AK3 | activates | gene | 0.50 |
| DDIT3 | activates | gene | 0.50 |
| CTSD | activates | gene | 0.50 |
| MAPK8 | activates | gene | 0.50 |
| RIPK3 | activates | gene | 0.50 |
| OPTN | activates | gene | 0.50 |
| PARKIN | activates | gene | 0.50 |
| LMNA | activates | gene | 0.50 |
| NDP52 | activates | gene | 0.50 |
| PTEN | activates | gene | 0.50 |
| FIP200 | activates | gene | 0.50 |
| FAM134B | activates | gene | 0.50 |
| PINK1 | activates | gene | 0.50 |
| ERN1 | activates | gene | 0.50 |
| CANX | activates | gene | 0.50 |
| BNIP3 | activates | gene | 0.50 |
| SQSTM1 | activates | gene | 0.50 |
| MAP1LC3B | activates | gene | 0.50 |
| SESN2 | activates | gene | 0.50 |
| DISC1 | activates | gene | 0.50 |
| PRKN | activates | gene | 0.50 |
| TAX1BP1 | activates | gene | 0.50 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||